Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g01795 ATGGCTAACTATTCTCATCCTCACATCTGCCAATGTCTGAGTCGTTTGCTTGGCTTCCGGCGACATTTTCCGGTCACTATCACCGGAAACCGCCGCAAAAGTGGCCAACAGTTGGTGGAGGAAGTGTTGTCTTTGGCCCAAGGCCTACTCCATCTTGGACTCGCACCTGGTCACGTGGTTGCCATCTCTGCATACAATAGTGATAGGTATCTGGAATGGTTATTAGCCATTGCATTTGTTGGAGGAATAGCTACTCCTCTGAACTATAGATGGAGTTTTGAAGAGGCAAGATTAGCATTGGCTGCAGTTAAGCCAGTGTTGTTAGTGACTGACGAGAGCAGTTACACATGGTACTCAAAACTCCAGCAAAATGATATTCCATCTCTGAAGTGGCATATTTTGGTGGATTCCCCTTCCTTTGATTTTACTAAGTGGAATGTGTTAACTCCAGAAATGATTAAGAGGCATCCTGTAAAGCTTGAACCATTTGATTACTCATGGGCACCTGAAGGCACTGTCATAATATGCTTTACTTCAGGAACTACGGGAAAGCCTAAGGGAGTCACTCTAAGCCATGGAGCTTTGGTCATACAATCCTTAGCCAAGATTGCCATAGTTGGCTACAATGAGGACGATGTCTATCTGCATACTGCTCCATTATGCCATATTGGTGGCTTGTCATCAGCCATGACCATGCTTATGGTTGGAGGTTGTCATGTCTTCATGCCAAAGTTTAATGCAGAATCAGCTGTTGGTGCCATAGAGCAATATGCAGTGACATCTTTTATCACAGTCCCTGCAATAATGGCCAGTCTGATTTCTGTAATTAGGCCCAAAGAGATATGGAAAGGAGGAGAAACTGTCAAGAAAATACTTAATGGGGGTGGAAGCCTCTCACATGAGCTAATCAAGGATACTAGCATTTTCTTTCACAAAGCTAAACTTATTTCAGCTTATGGGATGACAGAGACATGCTCTTCACTGACATTTCGGACCCTGTATGATCCAATGCATGAAAAGACAAACATGTCCCTTCAAACATTTGGTGTGGCAGGATCCAAGTTTATTCAGCAGCCACAAGGTGTTTGTGTTGGCAAGCCTGCACCCCATGTAGAACTGAAGATAAGTGCAGATGCTTCTGGTCAAATTGGGAGAATTCTAACTAGAGGACCACATATAATGCTTAGGTATTGGGAAACTCACGCAAATCCATTAAGTCCGAACAATAAAGCCTGGCTTGACACAGGTGATATTGGATCAATTGATCATTATGGTAATTTGTGGCTTCTTGGTCGAACAAATGGTCGAATCAAGAGTGGTGGGGAGAACATTTACCCTGAAGAGGTTGAGGCAATTCTACTACAACATCCAGGGATTGCAAGTGTTGTTGTTGTGGGAATCCCAGATGCTCACCTAACAGAGACGGTAGCAGCATGTATCCAACTTGGAGAAAATTGGCAATGGTCGGAGCAGTTGACTGTTTCAAATGAAGAGTTTAACCTATCTAGAAAGAATCTCCAGCTATATTGTGTAGAAAATCATTTGAGCAGGTTTAAGATACCAAAAATGTTTATTGCATGGAAAAAGCCATTTCCACTCACTACCACAGGGAAAATAAGAAGAGATGAAGTCAGAAAGGAAGTTATGTCTCAGCTACAATCTTTACATAGTAATCTTTGA 1680 0.4262 MANYSHPHICQCLSRLLGFRRHFPVTITGNRRKSGQQLVEEVLSLAQGLLHLGLAPGHVVAISAYNSDRYLEWLLAIAFVGGIATPLNYRWSFEEARLALAAVKPVLLVTDESSYTWYSKLQQNDIPSLKWHILVDSPSFDFTKWNVLTPEMIKRHPVKLEPFDYSWAPEGTVIICFTSGTTGKPKGVTLSHGALVIQSLAKIAIVGYNEDDVYLHTAPLCHIGGLSSAMTMLMVGGCHVFMPKFNAESAVGAIEQYAVTSFITVPAIMASLISVIRPKEIWKGGETVKKILNGGGSLSHELIKDTSIFFHKAKLISAYGMTETCSSLTFRTLYDPMHEKTNMSLQTFGVAGSKFIQQPQGVCVGKPAPHVELKISADASGQIGRILTRGPHIMLRYWETHANPLSPNNKAWLDTGDIGSIDHYGNLWLLGRTNGRIKSGGENIYPEEVEAILLQHPGIASVVVVGIPDAHLTETVAACIQLGENWQWSEQLTVSNEEFNLSRKNLQLYCVENHLSRFKIPKMFIAWKKPFPLTTTGKIRRDEVRKEVMSQLQSLHSNL* 560
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g01795 559 CDD AFD_class_I 175 540 - -
Lapu6g01795 559 SUPERFAMILY Acetyl-CoA synthetase-like 8 553 - -
Lapu6g01795 559 Pfam AMP-binding enzyme C-terminal domain 448 538 IPR025110 -
Lapu6g01795 559 Pfam AMP-binding enzyme 27 439 IPR000873 -
Lapu6g01795 559 Gene3D - 435 552 IPR045851 -
Lapu6g01795 559 Coils Coil 545 559 - -
Lapu6g01795 559 Gene3D - 10 432 IPR042099 -
Lapu6g01795 559 ProSitePatterns Putative AMP-binding domain signature. 175 186 IPR020845 -
Lapu6g01795 559 PANTHER ACYL-COA SYNTHETASE 33 551 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g01795 Lapu-Chr6 17745504 17753151 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu6g01795 37 552 Monolignol Biosynthesis Gene Families AT4G05160 27.290 2.92e-40 152
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g01795 K14760 - gmx:100809925 991.49