Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g01783 ATGAATTCCCTTCGTCTCACTACTTTATGCCGTGTTCTGGTTGTGCTTGGAACACTACACTGCTTCTCGTATGCACAACTAGATCCATCGTTTTACAATAGCACATGTTCGAATGTGCATTCAATTGTATATGATGTACTGTCAAATGTTTCCCAATCTGATCCCCGCATGCTTGCAAGTCTCATCAGGCTCCACTTTCACGACTGTTTTGTTCAAGGGTGTGATGCATCAATTCTTTTGAACGACACTGATACGATCGTGAGTGAACAAACTGCAGCACCAAATAACAACTCCATAAGAGGTTTGGATGTGGTGAATCAGATCAAGACAGCAGTAGAAGATGCTTGCCCCGGCATAGTTTCTTGTGCTGATATTCTTGCTCTTGCAGCAGAAATATCTTCTGAACTGGCTGATGGTCCTGTATGGGAAGTTCCATTGGGAAGAAGGGATAGTTTGACAGCAAATCAAACACTTGCTACTCAAAACCTTCCTGGTTTTAATTTTACGCTTGATCAACTTATTTCCAATTTTGATAATCAGAACCTCACCATTACTGATCTCGTTGCACTTTCAGGTGCTCATACAATTGGTAAGGCTCAGTGCAGATTTTTTGTTGATCGATTATACAATTTTGGCAACAGTAGCAACCCAGATCCCACTCTCAACACAACTCTCTTGGAATCATTGCGAGAAATATGTCCCAATGGTGGAACAGAAACCAATCTCACCAATCTGGACTTAACTACTCCTCACACATTCGACTCCAACTACTATTCCAATCTTCAATCTCTAAATGGCTTGCTTCGGAGTGATCAAGTCTTGTTCAACACAACTGATGCAGACACTATTCCTATCGTCAACTCTTACAGCACCAATCAAACTCTTTTCTTCCAAAATTTCATAGCTTCAATGATCAAAATGGGCAACATTGGAGTGTTAACGGGATCACAAGGAGAAATTCGAGCACAATGCAATTTTGTCAATGCAAATTCTTCTACATCTGCTATTTTTACCACCACAGAATCATCTCAACATGGAATGGTTAGCTCAATCTAA 1056 0.4062 MNSLRLTTLCRVLVVLGTLHCFSYAQLDPSFYNSTCSNVHSIVYDVLSNVSQSDPRMLASLIRLHFHDCFVQGCDASILLNDTDTIVSEQTAAPNNNSIRGLDVVNQIKTAVEDACPGIVSCADILALAAEISSELADGPVWEVPLGRRDSLTANQTLATQNLPGFNFTLDQLISNFDNQNLTITDLVALSGAHTIGKAQCRFFVDRLYNFGNSSNPDPTLNTTLLESLREICPNGGTETNLTNLDLTTPHTFDSNYYSNLQSLNGLLRSDQVLFNTTDADTIPIVNSYSTNQTLFFQNFIASMIKMGNIGVLTGSQGEIRAQCNFVNANSSTSAIFTTTESSQHGMVSSI* 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g01783 351 PRINTS Plant peroxidase signature 244 259 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lapu6g01783 351 PRINTS Plant peroxidase signature 100 113 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lapu6g01783 351 PRINTS Plant peroxidase signature 185 197 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lapu6g01783 351 PRINTS Plant peroxidase signature 260 277 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lapu6g01783 351 PRINTS Plant peroxidase signature 302 315 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lapu6g01783 351 PRINTS Plant peroxidase signature 138 153 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lapu6g01783 351 PRINTS Plant peroxidase signature 60 80 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lapu6g01783 351 PRINTS Plant peroxidase signature 36 55 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lapu6g01783 351 PRINTS Plant peroxidase signature 119 129 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lapu6g01783 351 ProSitePatterns Peroxidases proximal heme-ligand signature. 186 196 IPR019793 -
Lapu6g01783 351 CDD secretory_peroxidase 26 327 IPR033905 GO:0004601|GO:0042744
Lapu6g01783 351 Gene3D Peroxidase, domain 2 164 307 - -
Lapu6g01783 351 PANTHER PEROXIDASE 72-RELATED 23 327 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lapu6g01783 351 Pfam Peroxidase 44 291 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lapu6g01783 351 FunFam Peroxidase 164 307 - -
Lapu6g01783 351 Coils Coil 348 351 - -
Lapu6g01783 351 FunFam Peroxidase 30 174 - -
Lapu6g01783 351 SUPERFAMILY Heme-dependent peroxidases 26 328 IPR010255 GO:0004601|GO:0006979|GO:0020037
Lapu6g01783 351 Gene3D - 31 328 - -
Lapu6g01783 351 ProSiteProfiles Plant heme peroxidase family profile. 26 328 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lapu6g01783 351 PRINTS Haem peroxidase superfamily signature 58 72 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lapu6g01783 351 PRINTS Haem peroxidase superfamily signature 138 150 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lapu6g01783 351 PRINTS Haem peroxidase superfamily signature 186 201 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lapu6g01783 351 PRINTS Haem peroxidase superfamily signature 120 137 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lapu6g01783 351 PRINTS Haem peroxidase superfamily signature 246 261 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g01783 Lapu-Chr6 17599857 17602828 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu6g01783 12 334 Peroxidase AT5G06730 56.656 3.24e-128 370
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g01783 K00430 - gmx:100814455 525.398