Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g01780 ATGGGTTCCATGAGTGCAGTAGTAGTGGCAGTGTTGTGTGCATTTGCGATGCATGCAGGGTTTTTAGTCACTAATGCTCAGCTCAGTCCCACGTTCTACAACGAAACATGTCCACAGCTAAACGATATTGTTCTTCAAGTCGTCTCAAATGCTTCCCTCACCGATCCCCGAATCGGTGCCAGCCTCGTCAGGCTTCACTTTCATGACTGCTTTGTTCAAGGTTGTGATGCATCAGTTTTGCTGAACAACACTGATACCATAGAAAGCGAGCAAGATGCAATTCCAAATATCAACTCAATAAGGGGCTTGGACGTGGTGAATAACATCAAGACAGCAGTGGAAAATAGTTGTCCAGAAACAGTTTCTTGTGCTGATATTCTGGCTATTGCAGCTGAAGTAGGTTCTGTTCTGGGTGGTGGTCCATCATGGGAAGTTCCATTAGGAAGAAGGGATAGCTTAAACGCAAGTCGAGCCCTTGCAAATCAAAGCCTTCCAGCACCCTTCTTCACACTCGATCAACTCAATGCTTCCTTTGCAGCTCAAGGTCTCAACATCACTGATTTAGTTACTCTCTCAGGTGCTCATACGTTTGGAAGAGCACGCTGCAGTACATTCATAAACCGATTATACAACTTCAGCAACGGAAATCCTGATCCAACTCTGAATACAACTTATTTGGAAACATTGCGTGGGATATGCCCTGAGAATGCAACTGTGGATAACATCACCAATTTGGACCTGACCACACCTGATCAATTGGATAACGCATACTACTCCAATCTTCAGCAACTCAATGGCCTGCTTCAGAGCGACCAAGAACTGTTCTCCACTACTGTTGCTGATACCGTTGACCTTGTCAACAGTTTCAGCAGTGACCAAAGTGTTTTCTTTGCCAACTTTATAGTGTCAATGATAAAAATGGGAAATATTGGAGTGCTGACGGGAACTGATGGAGAAATTCGCACGCAATGTAATTTTGTGAACGAGGAATTGTCCGGAATATTAGCTGGTGTGGCCTCCAAAGATCCTAAAGTGAACCTGGTTGCTCAATCTAAGTAA 1059 0.4429 MGSMSAVVVAVLCAFAMHAGFLVTNAQLSPTFYNETCPQLNDIVLQVVSNASLTDPRIGASLVRLHFHDCFVQGCDASVLLNNTDTIESEQDAIPNINSIRGLDVVNNIKTAVENSCPETVSCADILAIAAEVGSVLGGGPSWEVPLGRRDSLNASRALANQSLPAPFFTLDQLNASFAAQGLNITDLVTLSGAHTFGRARCSTFINRLYNFSNGNPDPTLNTTYLETLRGICPENATVDNITNLDLTTPDQLDNAYYSNLQQLNGLLQSDQELFSTTVADTVDLVNSFSSDQSVFFANFIVSMIKMGNIGVLTGTDGEIRTQCNFVNEELSGILAGVASKDPKVNLVAQSK* 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g01780 352 Gene3D Peroxidase, domain 2 165 307 - -
Lapu6g01780 352 Gene3D - 32 328 - -
Lapu6g01780 352 SUPERFAMILY Heme-dependent peroxidases 27 328 IPR010255 GO:0004601|GO:0006979|GO:0020037
Lapu6g01780 352 Pfam Peroxidase 46 291 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lapu6g01780 352 ProSitePatterns Peroxidases active site signature. 59 70 IPR019794 GO:0004601
Lapu6g01780 352 ProSitePatterns Peroxidases proximal heme-ligand signature. 187 197 IPR019793 -
Lapu6g01780 352 FunFam Peroxidase 31 175 - -
Lapu6g01780 352 FunFam Peroxidase 165 307 - -
Lapu6g01780 352 PRINTS Plant peroxidase signature 37 56 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lapu6g01780 352 PRINTS Plant peroxidase signature 186 198 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lapu6g01780 352 PRINTS Plant peroxidase signature 61 81 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lapu6g01780 352 PRINTS Plant peroxidase signature 120 130 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lapu6g01780 352 PRINTS Plant peroxidase signature 101 114 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lapu6g01780 352 PRINTS Plant peroxidase signature 244 259 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lapu6g01780 352 PRINTS Plant peroxidase signature 302 315 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lapu6g01780 352 PRINTS Plant peroxidase signature 260 277 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lapu6g01780 352 PRINTS Plant peroxidase signature 139 154 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lapu6g01780 352 ProSiteProfiles Plant heme peroxidase family profile. 27 328 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lapu6g01780 352 PANTHER PEROXIDASE 72-RELATED 23 327 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lapu6g01780 352 CDD secretory_peroxidase 27 327 IPR033905 GO:0004601|GO:0042744
Lapu6g01780 352 PRINTS Haem peroxidase superfamily signature 187 202 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lapu6g01780 352 PRINTS Haem peroxidase superfamily signature 59 73 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lapu6g01780 352 PRINTS Haem peroxidase superfamily signature 121 138 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lapu6g01780 352 PRINTS Haem peroxidase superfamily signature 246 261 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lapu6g01780 352 PRINTS Haem peroxidase superfamily signature 139 151 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g01780 Lapu-Chr6 17565519 17569111 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu6g01780 21 328 Peroxidase AT5G06720 59.547 1.55e-131 377
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g01780 K00430 - gmx:548068 543.502