Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g01771 ATGAAGGAAGGTGGTGGTGGTGGTAGAAAGCAGGGTGCAGTCTCACCCTGTGCTGCATGCAAGCTTCTGAGAAGAAGGTGTGCTCAAGATTGTGTTTTTGCCCCATATTTCCCAGCAGATGAACCTCAAAAGTTTGCAAATGTGCACAAGGTGTTTGGTGCTAGCAATGTCAACAAGATGCTTCAGGACCTACCAATGCATCAACGAGGGGATGCAGTGAGTAGCATGGTGTATGAGGCGAATGCCAGAGTCCGAGACCCAGTTTATGGATGTGTTGGGGCCATCTCTTCTCTTCAGCAACAGATTGATGTGCTACAGACCCAATTGGCACTGGCCCAGGCTGAGGTAGCCCACCTTAGGGTCAGACAAAATAGGTGTTTTTCCAATCATGGGCCTAGACCAATTAGCCCAACCAATAGTGGGTTTCCATCATCCAAGACCTTGGACTCATGTGCCAAGCCTATTTTTGACATGGACATGGTGGTGGACCAGGCCAGTTATGGAAGTTCAATGTGGTCATGA 522 0.4885 MKEGGGGGRKQGAVSPCAACKLLRRRCAQDCVFAPYFPADEPQKFANVHKVFGASNVNKMLQDLPMHQRGDAVSSMVYEANARVRDPVYGCVGAISSLQQQIDVLQTQLALAQAEVAHLRVRQNRCFSNHGPRPISPTNSGFPSSKTLDSCAKPIFDMDMVVDQASYGSSMWS* 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g01771 173 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 13 124 - -
Lapu6g01771 173 ProSiteProfiles LOB domain profile. 15 116 IPR004883 -
Lapu6g01771 173 Coils Coil 95 122 - -
Lapu6g01771 173 Pfam Lateral organ boundaries (LOB) domain 16 113 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g01771 Lapu-Chr6 17491783 17498190 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu6g01771 1 173 AS2 family AT1G31320 77.011 4.80e-76 223
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Lapu6g01771 LOB 1.9e-43 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g01771 - - gmx:100794219 321.242