Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g01751 ATGACTGACGATACCATGTGTTCTCCAAGCGACAAGGACTTGTCGCTGAGTCCTAATCTTGATATCACGATAGATGGTTCTCCAAACAGTGAACAACTTCTTGGTATAGTGGATGAGGGCAACGAGCTTGATAATGAATGTGGACAATTGTTTGAGATTGATGGAAGTGAACATGAAAATGGGAGGGATGAAACCACAGTAGTTGATAGTCACAGTGGAGAATCTCAAGGGAAGGACTGCCCCCCACCAGTTGTGGGAATGGAGTTTGATACTTACGATGATGCATACAACTATTACAATACCTATGCCAAGGAAATTGGATTTGCTACTCGAGTTAAATCTTCATGGACAAAGCGAAACAGCAAAGAGAAGCGTGGTGCGGTTCTGTGCTGCAATTGTGAGGGTTTCAAAACAACCAAAGAAGCAAATAGTCACAGGAAAGAAACAAGAACTGGCTGTCTAGCAATGATTAGATTGAGATTAGTGGAATCTAACAGGTGGAGAGTTGATGAAGTCAAGCTTGAGCATAATCATTCATTTGATCCTGAAAGAGCACAAAATTCTAAATCACATAAGAGGATGGACAGTAGGGCCAAAAGAAAAGTTGAGCCAACTCTAGATGTTGAAGTAAGAACAATCAAGTTGTATCGAATGCCTATTGTAGATGCATCAGGTTATGGAAGCTCAAATTCAACTGAAGGTGGAACTAGCAACCACATTATTTGTTCCAAGCGTTTGAAACTTAAAAAGGGTGATCCGGAGCTTATTTCAAATTACTTCTGCCGCACTCAATTGACTAATCCTAACTTTTTTTATGTGATGGATCTGAATGATGATGGACAACTGAGGAATGTATTTTGGATTGACTCTCGATCTAGAGCTGCTTATAGTTATTTTGGTGATGTGATTGCATTTGACTCAACGTGTTTGTCAAACAACTATGAGATTCCTCTTGTTGCATTTGTTGGTGTTAATCACCATGGAAAATCTGTTTTGCTAGGATGTGGTCTGCTTGCAGATGAGACAGTTGAAACATATATTTGGTTATTTAGGGCATGGCTTACATGTATGACTGGTCGCCCTCCACAAACTATGATCACAAACCAGTGTAAAGCCTTGCAAAGTGCAATTGCAGAGGTTTTCCCGAGAGCTCACCATAGAATTTGTCTATCGCAAGTCATGCAGAGCATTCTTGGGTGTTTTGTGCAGTTTCAGGAGTACGAGGCATTTCAAATTGCGATTACTAAAGTCATATATGACTCTAAAACAGTAGATGAGTTTGAAAGGGCTTGGAATGATGTAACCCAGAATTTTGGAATAAGAAATCTTGAAAAGATCCGAACCTTGCATGAGGAACGAGAGCATTGGGCTCCAGTGTACTCCAAAGACACATTCTTTGCTGGAATATCTGATTATGAAAAGGGTGAATCAGTGGTTCCATTTTTTAAGGGTCATGTGCATCAACAAACTTCTTTGAAAGAATTTTTTGAGATTTATGAATTAGTTCAGCGAAAAAAGCATAAAACCGAAGTTCTTGATGATTTTGAGTCATGCGATTTGAGCTCATTACTGAAGACAAGATGCTACTACGAGTTGCAAATCTCTAAATTGTACACAAATGCTGTATTTAGGAAGTTCCAAGATGAGGTGGTGATGATGCCCTCTTGTTTCAGCATCACGCAGACTCAAACTAGTGGCTCCATAGTGACGTACATGGTAAAAGAACGCGAAGTGGAAGACCCTACAACAGATGCTAGGCATTTTGAAGTCATGTATGATAAAGCTGGAACAGAAGTACGCTGCATTTGTAGTTGCTTTAATTTCAAGGGCTATCTGTGCAGACATGCCTTGTATATCCTTAATTACAATGGTGTGGAGGAAATTCCATGTCAATACATTTTGTCAAGATGGAGGAAAGATTTTAAGCGTTTGTATGTACCTCATCTCAGTGCTGATGATGTTGATATTAGCAACCCAGTTCAGTGTTTTGATCATTTGTACAAACGTGCCATGCAAGTTGTTGAAGAAGGGATTATATCCCAAGATCATTATATGGTTTCTTGGCAAGCATTTAAAGAGTCTTTGAATAAGATTCGCCTTGTAGCAGACAAGATTGAATAA 2121 0.3942 MTDDTMCSPSDKDLSLSPNLDITIDGSPNSEQLLGIVDEGNELDNECGQLFEIDGSEHENGRDETTVVDSHSGESQGKDCPPPVVGMEFDTYDDAYNYYNTYAKEIGFATRVKSSWTKRNSKEKRGAVLCCNCEGFKTTKEANSHRKETRTGCLAMIRLRLVESNRWRVDEVKLEHNHSFDPERAQNSKSHKRMDSRAKRKVEPTLDVEVRTIKLYRMPIVDASGYGSSNSTEGGTSNHIICSKRLKLKKGDPELISNYFCRTQLTNPNFFYVMDLNDDGQLRNVFWIDSRSRAAYSYFGDVIAFDSTCLSNNYEIPLVAFVGVNHHGKSVLLGCGLLADETVETYIWLFRAWLTCMTGRPPQTMITNQCKALQSAIAEVFPRAHHRICLSQVMQSILGCFVQFQEYEAFQIAITKVIYDSKTVDEFERAWNDVTQNFGIRNLEKIRTLHEEREHWAPVYSKDTFFAGISDYEKGESVVPFFKGHVHQQTSLKEFFEIYELVQRKKHKTEVLDDFESCDLSSLLKTRCYYELQISKLYTNAVFRKFQDEVVMMPSCFSITQTQTSGSIVTYMVKEREVEDPTTDARHFEVMYDKAGTEVRCICSCFNFKGYLCRHALYILNYNGVEEIPCQYILSRWRKDFKRLYVPHLSADDVDISNPVQCFDHLYKRAMQVVEEGIISQDHYMVSWQAFKESLNKIRLVADKIE* 707
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g01751 706 SMART 26again6 599 626 IPR006564 GO:0008270
Lapu6g01751 706 MobiDBLite consensus disorder prediction 55 69 - -
Lapu6g01751 706 Pfam FAR1 DNA-binding domain 97 181 IPR004330 -
Lapu6g01751 706 Pfam MULE transposase domain 302 395 IPR018289 -
Lapu6g01751 706 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 70 699 IPR031052 GO:0006355
Lapu6g01751 706 MobiDBLite consensus disorder prediction 55 82 - -
Lapu6g01751 706 ProSiteProfiles Zinc finger SWIM-type profile. 588 624 IPR007527 GO:0008270
Lapu6g01751 706 MobiDBLite consensus disorder prediction 178 201 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g01751 Lapu-Chr6 17272579 17276810 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Lapu6g01751 MULE 5.6e-27 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g01751 K17604 - gmx:100796448 1337.4