Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g01746 ATGGCCAGGGAAAACCCTTACGATGAGGTTGTGTGCGTAACCGGGGCCAACGGTTTCATCGGTTCGTGGCTGGTTCGAACCCTCTTGGAGAATCAAGACCATAGCTACACCATCCACGCCACCGTCTTCCCCGGCTCCGACGCCTCTCATCTCTTCACCCTCCACCCCACCGCCGCCTCCCGCATCACCGTCTTCCCCGCCGACCTCCTTGACGCCGCCGCTATCTTCCGCGCCGTCGCCGGATGCTCCGGCGTCTTCCACGTGGCGTCTCCTTGCACGCTGGAGGACCCCGCGGATCCTCAAAGTGCGCTTCTGGAACCCGCGGTAAAGGGCACGCGGAACGTGCTCGAAGCCGCGAGGTGCGTAGGCGTGCGGCGCGTGGTGCTCACGTCCTCGATCTCCGCCATGGTGCCGAACCCGGGGTGGCCGGCGGGAAGGGCGATGGACGAGGAGTCGTGGACGGACGTGGAGTTCTGCAGGGCGAGGGGAAAGTGGTACCCGGTGGCGAAGACGGAGGCAGAGAGGGCGGCGTTGGAGTTCGAGGGCGGTGTTGAGGTGGTGACTATTCTGCCGGCGACGTGTCTGGGGCCGCTACTGCAGCCCGAGCTGAACGCGAGCTCCGGCGTGCTGCAGAGGCTGATGATGGGGTCGAGGGAGACGCAGGAGTATCACTGGTTGGGTGCGGTGCATGTGAAGGACGTTGCTAAAGCTCATGTGTTGCTCTATGAAACTCCCTCTGCTGCTGGTAGATATCTCTGCACGAATGGTATCTACCAGTTTTCTAGTTTTGCTGCCACTGTCTCTGAATTGTACCCTGACTTCCCTATCCACAGGTTCCCAGAAGAAACACAACCTGGCCTGACTCCGTGTAAAGATGCAGCAAGGAGACTAATAGACTTGGGCCTTGTCTTTACACCAATTCAAGAAGCTGTGAGAGAAGCAGCGGAGAGCCTTATAGCTAAAGGCTTCCTGCAGCGCTCATCCTCACAGAGTCATTAG 999 0.5996 MARENPYDEVVCVTGANGFIGSWLVRTLLENQDHSYTIHATVFPGSDASHLFTLHPTAASRITVFPADLLDAAAIFRAVAGCSGVFHVASPCTLEDPADPQSALLEPAVKGTRNVLEAARCVGVRRVVLTSSISAMVPNPGWPAGRAMDEESWTDVEFCRARGKWYPVAKTEAERAALEFEGGVEVVTILPATCLGPLLQPELNASSGVLQRLMMGSRETQEYHWLGAVHVKDVAKAHVLLYETPSAAGRYLCTNGIYQFSSFAATVSELYPDFPIHRFPEETQPGLTPCKDAARRLIDLGLVFTPIQEAVREAAESLIAKGFLQRSSSQSH* 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g01746 332 FunFam Cinnamoyl-CoA reductase 1 4 331 - -
Lapu6g01746 332 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 9 317 IPR036291 -
Lapu6g01746 332 Gene3D - 3 332 - -
Lapu6g01746 332 CDD FR_SDR_e 11 302 - -
Lapu6g01746 332 Pfam NAD dependent epimerase/dehydratase family 11 247 IPR001509 -
Lapu6g01746 332 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 10 312 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g01746 Lapu-Chr6 17240491 17252593 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu6g01746 9 324 Monolignol Biosynthesis Gene Families AT2G02400 64.890 6.73e-156 437
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g01746 - - vra:106775739 611.298
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu6g01746 6 17240491 17252593 Lapu6g01746 6 17240491 17252593 ECH