Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g01744 ATGTTACACAATACATTGCACTTTCATCTTGGGAAGAATAGGCTTTCAGGAGAAATTCCTCCTAAACTTTTTAACTCGAAAATGACTCTGATACATGTGATTTTTGACAGCAATGAACTAGTTGGCAGTATTCCAGAAACGCTTGGGCTAGTTACGAGTTTGACATTGGTGCGCTTTGAAAATAATTCACTGGATGGATATGTACCTCAGAGCATCAACAACCTTATCAATGTCAATGACCTGTTGCTGTCTCACAATAAGCTACAAGGTGCCCTGCCAAACCTTACTGGGATGAACTCCCTAAAATACTTGGATCTGAGCCACAATAGCTTTGATAACTCAAGCTTTCCACTGTGGCTTTCGAATATGAAGAATTTAAAAACATTACAAATGGAGAATTTGTACCTTGTAGGAACCATTCCGAATCTTTTATTTAGTCTTGCCAATTTACAAAATGTTGTGCTAAATGACAACCACCTTGGTGGAACCTTGGATATTGGCACCAACTATAGCAAACAACTGCAACTTATTGATTTGAGATCAAATTCCATTCAGGACTTCAAGCAACGAAATGATCCCCCACATATCAGGATAATACTTGCACAAAATCCGCTTTGCACAGAAACTGGAAGTATGGAGGAGGATTACTGCACCAACCTCAATATCCTCGATGAACCACAAAATAACTGTCAAAAAAGTAGCTGCAGCCCAAATCAGATTCTCAGCCCCAACTGCAAATGTGGATATCCATATATAGGAACTTTGACTTGCAGGGCCCCTTCCTATTTTGAATGGAGAAATACAAAAGTCATGGAGGAAGATTTAATGCATGAATTTCAATCTCATCATCTACCTGTCGATTCAGTTTCTTTAATCTTTTCAACTGAAGATCCATTTCGTAGTTTTGAGTTTACCATACGAGTTTTCCCACTAGACCAACATCCTTTCAGCCCACAAGACAGATCTAGGATAAGCTTCTTGCTTGGCAACCGAACTGCTAATAGTGCATTTGATTTTATTGCAGGAAACCAAGGTGATGGACCTAAGAAGTCAAGTAATTCATCAAAAACTGTAATAATTATTGGAGTAGCAATTGGCGGTACTTCTGTTATGCTGCTGTTATTAGTCCTGGCAGGTTTTTATGCTTTCCGCCAGAAGAGAAGGGCAGAAAGAGCAACATCTCGAAGCAATCCTTTCGGAAACTGGGATCCAAGTAAAAGCAACTGCGGCACCCCTCAGTTAAAAGCACCAAGGCAGTTCTCTTTTAAGGAAATTAAGAAATACACAAACAACTTCTCACAAGCCAATGCTATTGGATCAGGGGGTTATGGAAAGGTTTACCGGGGAACACTTTCCACTGGGCAAGTGGTAGCCATAAAGCGAGCTCAAAAAGAATCAAAGCAGGGAGCGCAAGAATTCAAAGCTGAAATTGAACTCCTTTCAAGGGTCCACCACAAAAATCTGGTTAGCCTTGTGGGATTCTGCTTTGAACGAGAAGAACAGATGCTGGTTTACGAATTTGTTCCTAATGGAACTTTGAAGGACGCTCTCACATCGAAATGTGGAATGACGTTGAGCTGGAGCAGAAGGCTGAAAGTAGCCCTTGGTGCTGCCAGGGGTTTGGCTTATCTTCATGAACATGCCAATCCCCCTATTATACACAGGGACATCAAGTCAAACAACATTTTGCTAGATGAGAACCACAATGCTAAAGTTTCTGATTTCGGTCTCTCCAAGTCTATCTTAGATGATGATAAAGATCATGTTACCACTCAAGTTAAAGGAACAATGGGCTACTTGGATCCAGATTATTATACTAGCCAGCGGTTGACTGAAAAGAGTGATGTCTATAGTTTTGGAGTGCTAATGCTGGAGCTAATTACTGCAAAAAAGCCAATAGAACGAGGGAAATACATTGTGAAAGTTGTCAAGAACACAATAGATAAGACAAAAGACTTGTATGGTCTGCACGAAATTATTGATCCAGCCATCAGTTCGGGATCAACACTGGAGGGTTTTGAGAGGTTTGTGAACCTTTCAATGGAATGTCTTAAAGAGACAGGAGTCGACAGGCCCACAATGAGTGAAGTGGTTAAAGAAATTGAAGACATGTTGCGATCTGTATGTTTGAACCTATCATCTGAGTTAGTAGCATCCACTTCATCCAGTTATAGATTTCAGGAGGTATGTATAGTGAGTTCCCAACAAGACCACCCTTACAGCAATGAATCTGTTGGTTCAAGTGCAGAACATTTATACTCAAAAGGTGAGCCTAGTTAA 2280 0.4048 MLHNTLHFHLGKNRLSGEIPPKLFNSKMTLIHVIFDSNELVGSIPETLGLVTSLTLVRFENNSLDGYVPQSINNLINVNDLLLSHNKLQGALPNLTGMNSLKYLDLSHNSFDNSSFPLWLSNMKNLKTLQMENLYLVGTIPNLLFSLANLQNVVLNDNHLGGTLDIGTNYSKQLQLIDLRSNSIQDFKQRNDPPHIRIILAQNPLCTETGSMEEDYCTNLNILDEPQNNCQKSSCSPNQILSPNCKCGYPYIGTLTCRAPSYFEWRNTKVMEEDLMHEFQSHHLPVDSVSLIFSTEDPFRSFEFTIRVFPLDQHPFSPQDRSRISFLLGNRTANSAFDFIAGNQGDGPKKSSNSSKTVIIIGVAIGGTSVMLLLLVLAGFYAFRQKRRAERATSRSNPFGNWDPSKSNCGTPQLKAPRQFSFKEIKKYTNNFSQANAIGSGGYGKVYRGTLSTGQVVAIKRAQKESKQGAQEFKAEIELLSRVHHKNLVSLVGFCFEREEQMLVYEFVPNGTLKDALTSKCGMTLSWSRRLKVALGAARGLAYLHEHANPPIIHRDIKSNNILLDENHNAKVSDFGLSKSILDDDKDHVTTQVKGTMGYLDPDYYTSQRLTEKSDVYSFGVLMLELITAKKPIERGKYIVKVVKNTIDKTKDLYGLHEIIDPAISSGSTLEGFERFVNLSMECLKETGVDRPTMSEVVKEIEDMLRSVCLNLSSELVASTSSSYRFQEVCIVSSQQDHPYSNESVGSSAEHLYSKGEPS* 760
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g01744 759 ProSitePatterns Serine/Threonine protein kinases active-site signature. 552 564 IPR008271 GO:0004672|GO:0006468
Lapu6g01744 759 FunFam Leucine-rich repeat protein kinase family protein 1 94 - -
Lapu6g01744 759 MobiDBLite consensus disorder prediction 738 759 - -
Lapu6g01744 759 SMART serkin_6 432 710 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu6g01744 759 Gene3D Ribonuclease Inhibitor 1 243 IPR032675 -
Lapu6g01744 759 ProSitePatterns Protein kinases ATP-binding region signature. 438 460 IPR017441 GO:0005524
Lapu6g01744 759 Gene3D Transferase(Phosphotransferase) domain 1 508 716 - -
Lapu6g01744 759 PANTHER RECEPTOR-LIKE PROTEIN 55 3 704 - -
Lapu6g01744 759 SUPERFAMILY L domain-like 4 237 - -
Lapu6g01744 759 SUPERFAMILY Protein kinase-like (PK-like) 418 722 IPR011009 -
Lapu6g01744 759 Pfam Protein tyrosine and serine/threonine kinase 435 700 IPR001245 GO:0004672|GO:0006468
Lapu6g01744 759 Gene3D Phosphorylase Kinase; domain 1 404 507 - -
Lapu6g01744 759 ProSiteProfiles Protein kinase domain profile. 432 705 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu6g01744 759 MobiDBLite consensus disorder prediction 392 413 - -
Lapu6g01744 759 FunFam LRR receptor-like serine/threonine-protein kinase HSL2 508 716 - -
Lapu6g01744 759 FunFam Leucine-rich repeat protein kinase family protein 401 507 - -
Lapu6g01744 759 MobiDBLite consensus disorder prediction 394 413 - -
Lapu6g01744 759 CDD STKc_IRAK 438 704 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g01744 Lapu-Chr6 17217236 17239232 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu6g01744 1 758 Receptor kinase-like Gene Family AT5G49760 49.677 0.0 666
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VIII-1 Lapu6g01744 PK_Tyr_Ser-Thr 6e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g01744 - - gmx:100810323 1152.12