Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g01734 ATGGCTTCGGAGATTGAAATTTCTCCGGCCGACGCTCGCAAGGCTCCCGGCAAGGACCAGCAAGCCGCCGGCGTCGGAATCCTTCTGCAGATCATGATGCTCGTCTTGTCCTTCGTCCTCGGCCACGTTCTCCGTCGCAAGAAGGTTTATATCATCCCCGAAGCTAGTGCTTCTCTTCTCATAGGGTTAATTGTTGGCATTCTAGCAAACATTTCAGACACCGAGACTAGTATCAGGGCGTGGTTCAATTTTCACGAGGAGTTTTTCTTCCTGTTCCTGCTACCTCCTATCATATTTCAGTCTGGGTTCAGTCTCGCACCTAAACCGTTTTTCTCGAATTTTGGAGCAATTGTCACATTTGCTATATTCGGCACCTTTATAGCTTCAATTGTTACGGGTATCTTGGTTTATCTTGGTGGTTTGCTCTTTCTAATGTATAAGCTACCTTTCGTAGAGTGCCTGATGTTTGGTGCTCTTATATCAGCTACTGATCCTGTTACTGTTTTGTCCATATTTCAGGAGCTGGGCACTGATGTCAATCTATATGCCTTGGTTTTTGGGGAATCTGTTTTGAATGATGCAATGGCAATTTCTTTGTACAGGACAATGTCATCTGTTAAAGCTCATCCATCTGGACAAAATTTATTGATGGTGGTTGTTCGGTTTTTGGAGACTTTTGTAGGGTCAATGTCAGCAGGTGTTGGAGTTGGGTTTATATCTGCTTTGCTATTTAAGTATGCAGGATTGGATATTGACAACCTTCAGAACTTGGAGAGCTGTCTTTTTGTCCTTTTCCCATATTTCTCGTACATGCTTGCTGAAGGCCTTGGTCTGTCTGGTATTGTATCAATACTGTTCACTGGAATAGTCATGAAGCATTACACGTATTCCAACTTGTCACAAAGTTCTCAAAGATTTGCCTCGGCCTTTTTCGAGTTGATATCATCTTTAGCTGAAACATTTGTATTTATATACATGGGCTTTGATATTGCTATGGAGCAACATAGCTGGTCCCATGTTGGATTTATATTCTTCTCCATTATATTTATTGGAATTGCAAGAGCTGCAAATGTCTTCTCTTGTGCTTATTTGGTCAATCTGGTCAGACCCAGTCATCGAAAGATACCTCCAAAACATCAGAAGGCACTTTGGTATAGTGGACTTCGGGGAGCAATGGCTTTTGCGCTTGCTCTGCAATCAGTTCATGATCTTCCAGAAGGACATGGACAGACCATCTTTACTGCAACTACTGCAATAGTTGTTTTAACGGTATTGCTTATTGGTGGTTCAACAGGTACCATGCTGGAAGCTCTAGATGTTGTAGGTGGAGATAATGATAGCCCTTTGGCTTCAGTTGGTACTATCCCGAATTTTGATGGAAACAATGGTTATATTGCTCCTCCTTACAATGAAGAGTCGTCTTCAGGGAACAAAATCAAGATGAAGCTAAAAGAATTCCACAAGAGTGCTGCATCTTTTACAGCATTTGATAAAAACTACCTCACCCCATTCTTTACAAGTCAAAATGGAGATGATGATGATGAAGGTAAGTTTTATGTAAAATTGTCATTCTCATTGAAAAATTGA 1587 0.4146 MASEIEISPADARKAPGKDQQAAGVGILLQIMMLVLSFVLGHVLRRKKVYIIPEASASLLIGLIVGILANISDTETSIRAWFNFHEEFFFLFLLPPIIFQSGFSLAPKPFFSNFGAIVTFAIFGTFIASIVTGILVYLGGLLFLMYKLPFVECLMFGALISATDPVTVLSIFQELGTDVNLYALVFGESVLNDAMAISLYRTMSSVKAHPSGQNLLMVVVRFLETFVGSMSAGVGVGFISALLFKYAGLDIDNLQNLESCLFVLFPYFSYMLAEGLGLSGIVSILFTGIVMKHYTYSNLSQSSQRFASAFFELISSLAETFVFIYMGFDIAMEQHSWSHVGFIFFSIIFIGIARAANVFSCAYLVNLVRPSHRKIPPKHQKALWYSGLRGAMAFALALQSVHDLPEGHGQTIFTATTAIVVLTVLLIGGSTGTMLEALDVVGGDNDSPLASVGTIPNFDGNNGYIAPPYNEESSSGNKIKMKLKEFHKSAASFTAFDKNYLTPFFTSQNGDDDDEGKFYVKLSFSLKN* 529
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g01734 528 NCBIfam sodium/hydrogen exchanger 3 31 445 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Lapu6g01734 528 PRINTS Na+/H+ exchanger signature 157 167 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Lapu6g01734 528 PRINTS Na+/H+ exchanger signature 102 116 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Lapu6g01734 528 PRINTS Na+/H+ exchanger signature 117 125 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Lapu6g01734 528 PRINTS Na+/H+ exchanger signature 88 99 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Lapu6g01734 528 PANTHER SODIUM/HYDROGEN EXCHANGER 12 516 IPR018422 GO:0006812|GO:0015385|GO:0016020|GO:1902600
Lapu6g01734 528 Pfam Sodium/hydrogen exchanger family 33 436 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Lapu6g01734 528 Gene3D - 150 202 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g01734 Lapu-Chr6 17156978 17164754 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu6g01734 20 505 Antiporters AT3G05030 31.478 1.82e-54 190