Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g01703 ATGGATTCAAAAACTAGTTCTAGATCTCTCCCAAAACACCATCAGAAGACAGCTGGAATTCAAACTCTTGAGACAAAAGACAACGGGTCTTCAGGCAGTCCAGCTTCCCTGAAAACAGGGAAAACTGAACTACCCGGTCAGGAGGATTTATCAAGGTCTGTAGGGAACTTGTCCAAACAGAATACTGGGGAAACTGGTGAAAACAAGAAGTTAGGAGTTTCAATCCAAAAGGGATCTGCTGATTACTTGAGCAATAAAAATAGTTCTGGTGCTTCTTCATCTGTTGTCGATAAGGCAGATCGAGATGTTAATGAGAACATAGGCTCACAGGAAAGCTCCATTGATCAAGACAAGAAGACATCCGAATATGGAAGTGTTAAGAACAGTTCTGTTTCTGCCAAAGTTAGTGATGGGGCCAGCAGTCTTGCAAAGACAAGTGGAAGTGCCAAGATTAGTGACAGAGCTGATTTTGTTGAGAGTGGTAAGAGCAGTATTTACAGAGGAAGCACAAGCAGTGATGTGAGTGATGAGAGTACTTGTAGTAGCTTTAGCAGCAGCATAAACAAACCTCACAAGGCAAATGACTTGAGATGGGAAGCCATTCAAGCAGTTCGAAGTAGAGATGGGGTGTTGGGATTAGGTCACTTTAGACTACTGAAGAGGCTGGGTTGTGGGGATATAGGAAGTGTTTACCTCTCTGAGTTGAGTGGAACTAAATGTTACTTTGCAATGAAGGTAATGGACAAAGGGTCCCTAGCTAGTCGTAAAAAGTTGCTCCGTGCCCAGACAGAACGAGAAATCCTACAGTCTCTTGACCACCCTTTTCTCCCAACTTTGTACACCCATTTTGAGACTGAGAAATTCTCATGTTTGGTAATGGAATTCTGCCCAGGTGGTGACCTCCATACTCTTAGGCAGAAGCAACCAGGAAAGCATTTTCCTGAGCAAGCAGTAAAATTTTATGTGGCAGAGGTCCTTCTGGCTTTGGAGTACCTCCACATGCTTGGGATTGTCTACCGTGACCTTAAGCCAGAAAATGTTCTTGTCAGGGACGACGGACATATTATGCTCTCTGACTTTGATCTTTCCCTCCGATGTGCCGTCAGTCCGACTCTTGTCAAAACCTCATCCACCGATTCTGAGCCTTTAAGAAAGAACCCTGTTTACTGTGTCCAACCTGCATGTATTGAGCCACCTTCCTGCATCCAACCATCCTGTGTTGCCCCTACGACATGCTTTTCACCCCGGCTATTCTCTAGCAAATCAAAGAAAGACCGGAAGCCAAAAACTGAAATTGGCAACCAAGTGAGTCCATTACCTGAGCTGATTGCAGAGCCTACTGATGCTCGGTCCATGTCATTTGTTGGAACTCATGAATACTTGGCTCCTGAGATTATTAAGGGTGAAGGTCATGGGAGTGCAGTTGATTGGTGGACTTTTGGGATCTTTCTATACGAGCTGTTGTTCGGTAAAACTCCCTTCAAGGGATCCGGTAACCGAGCCACGCTGTTTAACGTTGTGGGACAGCCGCTGAGATTTCCAGAAGCACCTGTTGTCAGTTTTGCAGCAAGGGATCTTATAAGGGGGTTGCTTGTGAAAGAACCTCAGCACAGATTGGCATACAAAAGAGGTGCAACTGAGATCAAGCAACACCCCTTTTTCGAAGGTGTGAACTGGGCATTGATCAGATGTGCTACCCCACCTGAGATCCCAAAGGCTGTAGAGTTTGAGAAGATACCCTCCCCAGCCTCATCAGGTGCTGGTGAAAAGGCTGTTAACCACATGTCAATAGCTAATCAGAAAGGTTCTGATAATTATCTGGAGTTTGATTTCTTCTAG 1839 0.4508 MDSKTSSRSLPKHHQKTAGIQTLETKDNGSSGSPASLKTGKTELPGQEDLSRSVGNLSKQNTGETGENKKLGVSIQKGSADYLSNKNSSGASSSVVDKADRDVNENIGSQESSIDQDKKTSEYGSVKNSSVSAKVSDGASSLAKTSGSAKISDRADFVESGKSSIYRGSTSSDVSDESTCSSFSSSINKPHKANDLRWEAIQAVRSRDGVLGLGHFRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKGSLASRKKLLRAQTEREILQSLDHPFLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKHFPEQAVKFYVAEVLLALEYLHMLGIVYRDLKPENVLVRDDGHIMLSDFDLSLRCAVSPTLVKTSSTDSEPLRKNPVYCVQPACIEPPSCIQPSCVAPTTCFSPRLFSSKSKKDRKPKTEIGNQVSPLPELIAEPTDARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNVVGQPLRFPEAPVVSFAARDLIRGLLVKEPQHRLAYKRGATEIKQHPFFEGVNWALIRCATPPEIPKAVEFEKIPSPASSGAGEKAVNHMSIANQKGSDNYLEFDFF* 613
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g01703 612 MobiDBLite consensus disorder prediction 12 40 - -
Lapu6g01703 612 SMART serkin_6 216 554 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu6g01703 612 Pfam Protein kinase domain 217 370 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu6g01703 612 Pfam Protein kinase domain 451 554 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu6g01703 612 Gene3D Transferase(Phosphotransferase) domain 1 300 364 - -
Lapu6g01703 612 FunFam Serine/threonine-protein kinase AGC1-7 447 572 - -
Lapu6g01703 612 MobiDBLite consensus disorder prediction 123 145 - -
Lapu6g01703 612 MobiDBLite consensus disorder prediction 78 95 - -
Lapu6g01703 612 CDD STKc_phototropin_like 215 572 - -
Lapu6g01703 612 SUPERFAMILY Protein kinase-like (PK-like) 191 574 IPR011009 -
Lapu6g01703 612 MobiDBLite consensus disorder prediction 49 69 - -
Lapu6g01703 612 PANTHER FLIPPASE KINASE 1-RELATED 67 578 - -
Lapu6g01703 612 Gene3D Phosphorylase Kinase; domain 1 216 299 - -
Lapu6g01703 612 ProSiteProfiles Protein kinase domain profile. 216 554 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu6g01703 612 Gene3D Transferase(Phosphotransferase) domain 1 447 572 - -
Lapu6g01703 612 FunFam serine/threonine-protein kinase D6PK-like 300 367 - -
Lapu6g01703 612 FunFam Serine/threonine-protein kinase D6PK-like 214 299 - -
Lapu6g01703 612 ProSitePatterns Serine/Threonine protein kinases active-site signature. 337 349 IPR008271 GO:0004672|GO:0006468
Lapu6g01703 612 MobiDBLite consensus disorder prediction 1 145 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g01703 Lapu-Chr6 16890630 16895243 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu6g01703 67 612 AGC Kinase Gene Family AT5G47750 80.256 0.0 871
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Lapu6g01703 Pkinase 1.6e-36 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g01703 K08286 - gmx:100798088 1084.32
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu6g01703 6 16890630 16895243 Lapu6g01703 6 16890630 16895243 ECH