Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g01702 ATGTCAGGGGAAACGAGGCATGATTGTTTGCACTACGAATCTGATGAAGAAACCTCTAGCTGCTCTTGCGGTTTCATTGGGTTCGGGAGAAACCAAGTGTATGATTGCAGCACCAACGAAGTAAACAATGAAGATTCAGAGGAGCTATTTGAGATCAATCTCAAGGAGCCATTGGATACAATATCAGAAGACTGTGAGAGCAGTGTGTTCTCTTTCGACATTCACAACAACAACGACAAAGATGTTGTTCATGTGGCAGTTGACCACGTTGGAGAATCAAGCATAGAAGCCCTTTTATGGACTTTGAAGCATGCTGTCACACCCTCTACCACTGTCTATCTCATACACGTTTTTCCTGAAATCAGGCTCATCCCAAGTCCATTTGGAAAATTTCCAAGGAGTCGTGTAAATCCAGAGTATGTTAACTTTCACTTGACTCAACAGAAATGCAAGAGAAAATTGCTCCTTCAAGAGTTCATTGACTTGTGCCTTGATTCCAAGGTTAAGGTGGAGGTGATGCTGGTAGAGGGTGACAACGTTGCCAAAGCAATAACAGACCTAGTTAGAGATCATGATATAAGAAAATTGGTGATTGGAATCACCAAATCTAATTTAAGCAAATCCGTCTCTAGAAGGAGAAATGGCATAGCAGATAAGGTCCTCAGAAATGCAGCAGAAATCTGTGATGTTAAAATAATATGCGATGGAAAGGAAGTAATAGATCAAATGATTGATTGTATTTGGTCATGTGACATTAGCAGTTTCAGAGAAGCACATGAAGAGAATGAATCATGTGGGTTTGTTCCTCTCATGCGTTTTGTGCCCAATCCTATATGGCTATTTAGACTCAGATTTTGA 858 0.4056 MSGETRHDCLHYESDEETSSCSCGFIGFGRNQVYDCSTNEVNNEDSEELFEINLKEPLDTISEDCESSVFSFDIHNNNDKDVVHVAVDHVGESSIEALLWTLKHAVTPSTTVYLIHVFPEIRLIPSPFGKFPRSRVNPEYVNFHLTQQKCKRKLLLQEFIDLCLDSKVKVEVMLVEGDNVAKAITDLVRDHDIRKLVIGITKSNLSKSVSRRRNGIADKVLRNAAEICDVKIICDGKEVIDQMIDCIWSCDISSFREAHEENESCGFVPLMRFVPNPIWLFRLRF* 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g01702 285 Gene3D HUPs 73 233 IPR014729 -
Lapu6g01702 285 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 91 232 - -
Lapu6g01702 285 Pfam Universal stress protein family 83 224 IPR006016 -
Lapu6g01702 285 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 52-LIKE 35 248 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g01702 Lapu-Chr6 16887132 16888881 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu6g01702 83 236 U-box Gene Family AT2G45910 29.560 2.55e-13 68.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g01702 - - gmx:100818837 476.092
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu3g00056 3 921204 922418 Lapu6g01702 6 16887132 16888881 PCT