Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g01701 ATGTCTGAAATCTTAACTGAGACCTTGCACCATTCAGATGAAGCTGTGTCCCTGGAGGTGGAGCACAACTACCGTGGAAGAAGGAGCAGCAGCGTGAGTGAGATAGAGGAAGATAACTCCTCCTCACACTTGCCCTTCAACAATGATGCTCCTAAACCTATGCTTACCATTAGTGAAGGAGAGAGGGAGGAGGAAGACATTGTCTATGTGGCAGTGGGAAAGAGCCACAGCAGCATCGAAGCGTTGTCATGGACCCTCAACAACTTCACCACTCCATCTACCATGCTCTATCTCATACACGTTTTCCCAGAGATCAAGCTCCTTCCAAACCCATTGGGAGTGGGAATGATTCCAAAGGACCAAGTGAGTCCTGAGCAGGTAGAGAGCTACATGGCCCAAGAAAGAGGCAAGAGAAGAGAGCTCCTTAACAAATTCCTCCAATTATGTTCTGCCTCCAAGGTTAAGGTGGACACAATCTTGATTGAGAGTGACTTGATTGCAAAGGCTATCATCGACCTGATTCCTATTCTTCAAATAAGAAAACTAGTGATTGGAGCCAGCAAATCCCAAATAAGAAAATTGAGATCAAGGAAAGGGAGTGGCATGGCTGATCAGATACTTCAGAATGCTCCAGAAAGTTGCGATGTGAGTATCGTATGTGAAGGAAAGGAAGTAAATGAACAGATAGCTGGTGCCATTGCCACTGATACTTCCATGTCCCAGAAAAACAAGCATCAGCAAAATTCTTCGGTTTCATGTGTCTGTTTCAACTTTTAA 777 0.4492 MSEILTETLHHSDEAVSLEVEHNYRGRRSSSVSEIEEDNSSSHLPFNNDAPKPMLTISEGEREEEDIVYVAVGKSHSSIEALSWTLNNFTTPSTMLYLIHVFPEIKLLPNPLGVGMIPKDQVSPEQVESYMAQERGKRRELLNKFLQLCSASKVKVDTILIESDLIAKAIIDLIPILQIRKLVIGASKSQIRKLRSRKGSGMADQILQNAPESCDVSIVCEGKEVNEQIAGAIATDTSMSQKNKHQQNSSVSCVCFNF* 259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g01701 258 MobiDBLite consensus disorder prediction 26 52 - -
Lapu6g01701 258 Gene3D HUPs 59 230 IPR014729 -
Lapu6g01701 258 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 70 219 - -
Lapu6g01701 258 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 52-LIKE 23 257 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g01701 Lapu-Chr6 16882116 16884116 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu6g01701 71 223 Plant U-box Gene Family AT5G57035 32.026 5.01e-17 78.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g01701 - - gmx:100781056 390.578