Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g01698 ATGGATAAAGTTAAACTCTTTAGTTTAAAAGAGTTGGAGAAGGCCACCGATAACTTTAATATGAATGGAGTACTTGGAAGAGGAGGTCAAGCTACTGTTTACAAAGGCATGTTGATAGATGGAACAATTATTGCAGTGAAAAAATTTAAGGTCCAAGGAAAAATTGAAGAATTCATCAATGAATTTGTCATCCTTTCACAAATTAACCATAGAAACGTGGTGAAGTTGTTAGGAAGTTGTTTGGAGACTAAAATTCCTTTACTTGTTTATGAATTCATTCCTAATGGTAACCTTTATGAGTACTTACATCAACAAACTGAAGATTTCCTAATGACATGGGATACGCGCTTGAGAGTTGCCACTGAAGTTGCTGGAGCTTTATTTTACTTGCACTCTGCTGCTTCTCAGCCCATTTATCATAAAGACATCAAGTCAACAAATATACTACTCGATGAAAAGTATAGGGCAAAAGTAGCAGATTTTGGCACATCAAGAATGATTTCCATTGATGTTACTCACCTCACCACAGTGGTTCAAGGAACGTTTGGATACTTAGACCCTGAATTTTTTCAAACTAGTCAATTCACAGAAAAAAGTGATGTCTACAGCTTTGGAGTAGTTCTTGTTGAACTCTTAACAGGACAAAAACCAATAACCCTCCTAAGTCCAGAGGAGGCCAAAGGTTTAGCTTCATATTTCATCACATGTGTGGAGGAAAATCGTTTGTTTGATATTATTGATGAAAGAGTGATGAAAGAAGGGGAGAAAGATCATATTATTGAAGTTGCCAATCTTGCAAGCAGATGTTTAGAGCTTAATGGAAAGAGACGACCAACTATGAAGGAAGTTACATTGGAATTAGAAAGTATCCGAAAATTGGAAGGAAAATTTGATGCACAAGAAATACTTAATGAACTTGATAGAAGTAAAGATTATCAATCTTGGGATGAGTATTCTAATAGTTCAGAAATTAGGTCAACTTTTGACATAAGTAGCAGAATACCAACTTTGAAGGATATTCATATTCATACCATATAA 1038 0.3497 MDKVKLFSLKELEKATDNFNMNGVLGRGGQATVYKGMLIDGTIIAVKKFKVQGKIEEFINEFVILSQINHRNVVKLLGSCLETKIPLLVYEFIPNGNLYEYLHQQTEDFLMTWDTRLRVATEVAGALFYLHSAASQPIYHKDIKSTNILLDEKYRAKVADFGTSRMISIDVTHLTTVVQGTFGYLDPEFFQTSQFTEKSDVYSFGVVLVELLTGQKPITLLSPEEAKGLASYFITCVEENRLFDIIDERVMKEGEKDHIIEVANLASRCLELNGKRRPTMKEVTLELESIRKLEGKFDAQEILNELDRSKDYQSWDEYSNSSEIRSTFDISSRIPTLKDIHIHTI* 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g01698 345 FunFam Wall-associated receptor kinase 2 93 310 - -
Lapu6g01698 345 Gene3D Transferase(Phosphotransferase) domain 1 93 314 - -
Lapu6g01698 345 FunFam Protein kinase superfamily protein 50 96 - -
Lapu6g01698 345 SMART serkin_6 19 290 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu6g01698 345 ProSitePatterns Serine/Threonine protein kinases active-site signature. 138 150 IPR008271 GO:0004672|GO:0006468
Lapu6g01698 345 Gene3D Phosphorylase Kinase; domain 1 1 92 - -
Lapu6g01698 345 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 3 298 IPR045274 GO:0007166
Lapu6g01698 345 Pfam Protein tyrosine and serine/threonine kinase 21 286 IPR001245 GO:0004672|GO:0006468
Lapu6g01698 345 ProSiteProfiles Protein kinase domain profile. 19 290 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu6g01698 345 SUPERFAMILY Protein kinase-like (PK-like) 4 287 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g01698 Lapu-Chr6 16844504 16845601 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu6g01698 5 291 Receptor kinase-like Gene Family AT1G79670 66.090 1.73e-142 418
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Lapu6g01698 PK_Tyr_Ser-Thr 5.9e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g01698 - - vun:114188578 580.867