Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g01697 ATGCTCACACTTGCATATAAGTGGAAAAACTTATTATTTTCATGTATTGATGGGTCAAACACAGGAATTTCTATAAGCTTGGCAAGCATCATTTTCTTCCTTATTTTATGGTGGGTGGTTAAGGTTACAAAAAAAGTTTTAAAAAAGAAACAGAGGAAAAAAATCTTCAAAAAAAATGGTGGACTATTGTTAGAACAAAGATTGTCTTCAGGTGAAGTTAATGTAGATAAAGTTAAACTCTTCAGTTTAAAGGAACTGGAAAAGGCCACCAACAACTTTAATACAAATAGAGTACTTGGAAAAGGAGGTCAAGCTACTGTCTACAAAGGAATGTTGATAGACGGAACAATTATAGCGGTGAAAAAATTTAAGGTTCAAGGAAGAATTGAAGAATTCATCAATGAATTTGTCATTCTTTCACAAATTAACCATAGAAATGTGGTCAAGTTGTTGGGGAGTTGTTTAGAGACCGAAATTCCTTTACTTGTTTATGAATTCATTTCTAATGGTAACCTTTTTGAGTACTTGCATCAACAAAATGAGGATTTACCAATGACATGGGATGTTCGTTTGAGAATTGCCACTGAAATTGCGGGAGCTTTATTTTACTTGCACTCTGCTGCTTCCCAACCTATTTGTCATAAAGACATCAAGTCAACAAACATACTATTGGATGAAAAATACAGGGTAAAAGTAGCAGACTTTGGCACGTCAAGAATGATTTCTATTGAAGCAACCCATCTCACTACAGTAGTTCAAGGAACATTTGGATATTTGGACCCTGAATTTTTTCAAACAAGTCAATTCACGGATAAAAGTGATGTCTATAGCTTTGGAGTAGTTCTTGTTGAACTCTTAACAGGAAAAAAGCCAATATCCCTCCTAAGTCCAGAGGAAACCAAAAGTTTAGCTTCATATTTTATCAAGTGTATGGAGGAAAATAATTTGTTTAATATTATTGATGAAAACGTTATGAAAGAAGGGGAGAAAAACGATATCATGGTTGTTGCTAATCTTGCAAGTAGATGTTTAGAACTAAATGGAAAGAGAAGACCAACTATGAAGGAATTCACATTGAAATTAGAAGGTATCCGAAGATTGGAAGGAAAGTCCAACGTACAAGAAAGACATAATGAACTTGTTAGAAGTAAAGACTATCAATCTTGGGATGAGTATTCTACTACCTCATAA 1191 0.3384 MLTLAYKWKNLLFSCIDGSNTGISISLASIIFFLILWWVVKVTKKVLKKKQRKKIFKKNGGLLLEQRLSSGEVNVDKVKLFSLKELEKATNNFNTNRVLGKGGQATVYKGMLIDGTIIAVKKFKVQGRIEEFINEFVILSQINHRNVVKLLGSCLETEIPLLVYEFISNGNLFEYLHQQNEDLPMTWDVRLRIATEIAGALFYLHSAASQPICHKDIKSTNILLDEKYRVKVADFGTSRMISIEATHLTTVVQGTFGYLDPEFFQTSQFTDKSDVYSFGVVLVELLTGKKPISLLSPEETKSLASYFIKCMEENNLFNIIDENVMKEGEKNDIMVVANLASRCLELNGKRRPTMKEFTLKLEGIRRLEGKSNVQERHNELVRSKDYQSWDEYSTTS* 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g01697 396 SMART serkin_6 93 364 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu6g01697 396 SUPERFAMILY Protein kinase-like (PK-like) 74 359 IPR011009 -
Lapu6g01697 396 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 33 371 IPR045274 GO:0007166
Lapu6g01697 396 Pfam Protein kinase domain 94 357 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu6g01697 396 ProSiteProfiles Protein kinase domain profile. 93 364 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu6g01697 396 PIRSF ILK 41 378 - -
Lapu6g01697 396 Gene3D Transferase(Phosphotransferase) domain 1 167 389 - -
Lapu6g01697 396 FunFam Wall-associated receptor kinase 2 167 384 - -
Lapu6g01697 396 ProSitePatterns Serine/Threonine protein kinases active-site signature. 212 224 IPR008271 GO:0004672|GO:0006468
Lapu6g01697 396 FunFam Wall-associated receptor kinase 2 63 166 - -
Lapu6g01697 396 Gene3D Phosphorylase Kinase; domain 1 65 166 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g01697 Lapu-Chr6 16830769 16842041 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu6g01697 22 375 Receptor kinase-like Gene Family AT1G69730 59.104 3.25e-148 437
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Lapu6g01697 Pkinase 5.9e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g01697 - - vum:124846131 582.408