Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g01694 ATGAGTGAACAATTGGGGCTGCTAAAAGTCATCGTTGTACAAGGGAAAAGGTTGGTTATCCGGGATTTCAAGACCAGTGATCCTTATGTTGTGCTGAAACTAGGGAACCAGACTGCAAAGACCAAGGTAATTAACAGTTGCTTGAATCCTGTTTGGAATGAAGAACTGACTTTCACTCTTACAGAACCCTTGGGAGTTCTGAATTTGGAAGTGTTTGATAAAGATCTTTTGAAGGCTGATGACAAGATGGGAAATGCTTTCCTCAACCTTCAACCATTAGTCTCTGCAGCCAGATTAAGAGATATCTTAAGAGTGTCCTCTGGTGAGACAACCTTAAGGAAGGTCATACCTGATGCTGAAAACTGTCTTGTCCGTGAAAGCAGTATCAATTGTGTTAATGGTGAGGTGGTGCAGAATGTTTGGTTAAGGCTTCGTGGAGTAGAGTCTGGAGAATTAGAATTGATCATCAAGCTGACCACACCTATTACTCCTGCAACATAG 501 0.4192 MSEQLGLLKVIVVQGKRLVIRDFKTSDPYVVLKLGNQTAKTKVINSCLNPVWNEELTFTLTEPLGVLNLEVFDKDLLKADDKMGNAFLNLQPLVSAARLRDILRVSSGETTLRKVIPDAENCLVRESSINCVNGEVVQNVWLRLRGVESGELELIIKLTTPITPAT* 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g01694 166 PANTHER PROTEIN C2-DOMAIN ABA-RELATED 4 4 158 IPR044562 -
Lapu6g01694 166 CDD C2_ArfGAP 5 150 - -
Lapu6g01694 166 ProSiteProfiles C2 domain profile. 1 103 IPR000008 -
Lapu6g01694 166 SMART C2_3c 7 102 IPR000008 -
Lapu6g01694 166 Pfam C2 domain 7 99 IPR000008 -
Lapu6g01694 166 PRINTS C2 domain signature 22 34 IPR000008 -
Lapu6g01694 166 PRINTS C2 domain signature 46 59 IPR000008 -
Lapu6g01694 166 PRINTS C2 domain signature 67 75 IPR000008 -
Lapu6g01694 166 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 3 159 IPR035892 -
Lapu6g01694 166 Gene3D C2 domain 1 116 IPR035892 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g01694 Lapu-Chr6 16820771 16823566 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu6g01694 1 154 C2H2 Transcription Factor Family AT4G05330 46.104 1.87e-38 132