Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g01688 ATGGACCTCTTCGCCGCCGATCACTTTCCTGTCCCCGACCACGTTGCTCCATTTCCTGATTCCGGCGACCTCCTTTTCCCCGCCGACCTCCTCTCCCAACGCCACAACCCTCAGAAGCTCCGTCCCATCCGGTCCCTCCCCTCCGCCCTCAATGTCCACCCTCGTCCACCCGATCCAATTGCCTCCGGGTCGGGTTACACCCTGAGCCACGAATCTGCCTCGGCTTTGGATGCGGAGGATGAAGATGAGGATGGTGACAATTCATCAGCAAGTACTGAAGAAAATGGCCCTAGGAAAAGGAGGAGAAAGACGGTGAGAAAGCTTGAAGGTTTTGTCAAGGATTTGGTGACAAAGGTGATGGAGAAGCAAGAGCAGATGCACAAACAGTTAGTGGAAATCATAGAAAACAAGGAAAGGGAAAGGATAAAGAGAGAAGAAGCTTGGAAGAATGAGGAGATGGAGAGAATTAGAAAAGAGGAAGAGGCTAGAGCCCAAGAAAAGTCCCGCAATTTGGCCCTCATATCCTTCATTCAGAATCTGCTGGGCCACGAAATTCAAATTCCCCAACCAGTAGAAGCATGCAGCAAAAGAGAAGAGGATGAAGTTGAGGTGAATGCTCAAAAAGAATTTAATAGTGATCCTAGTAAGAGTAGATGGCCTGATGTTGAAGTACAATCACTTATCACTGTGAGAACTTCATTGGAGCACAAGTTTCGTTTCATGGGATCGAAAGGCTCAATATGGGAGGAGATATCTGAAGCAATGCATGGCTTGGGCTATAATCGCTCTGCAAAGAAGTGTAAGGAGAAGTGGGAAAACATCAACAAGTACTATAAAAGGACAATAGGGAGTGGCAAGAAAAGGCGTCAAAATAGTAAAAGTTGCCCTTATTTTGATGAGTTGGACATTCTGTATAGAAACGGCCTCCTAAGTATTGGAAATTCCTTGAGCAATACCACTGATGCTCCCCAGATTGAAGAAAAGGAGTAG 990 0.4677 MDLFAADHFPVPDHVAPFPDSGDLLFPADLLSQRHNPQKLRPIRSLPSALNVHPRPPDPIASGSGYTLSHESASALDAEDEDEDGDNSSASTEENGPRKRRRKTVRKLEGFVKDLVTKVMEKQEQMHKQLVEIIENKERERIKREEAWKNEEMERIRKEEEARAQEKSRNLALISFIQNLLGHEIQIPQPVEACSKREEDEVEVNAQKEFNSDPSKSRWPDVEVQSLITVRTSLEHKFRFMGSKGSIWEEISEAMHGLGYNRSAKKCKEKWENINKYYKRTIGSGKKRRQNSKSCPYFDELDILYRNGLLSIGNSLSNTTDAPQIEEKE* 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g01688 329 Coils Coil 120 170 - -
Lapu6g01688 329 Gene3D - 219 280 - -
Lapu6g01688 329 MobiDBLite consensus disorder prediction 41 103 - -
Lapu6g01688 329 PANTHER FI21293P1 69 318 - -
Lapu6g01688 329 CDD GT1 217 281 - -
Lapu6g01688 329 Pfam Myb/SANT-like DNA-binding domain 217 302 IPR044822 -
Lapu6g01688 329 ProSiteProfiles Myb-like domain profile. 211 275 IPR001005 -
Lapu6g01688 329 FunFam Trihelix transcription factor GT-2 219 280 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g01688 Lapu-Chr6 16707827 16709723 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu6g01688 99 307 Trihelix Transcription Factor Family AT5G47660 45.982 2.76e-54 181
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Lapu6g01688 Myb_DNA-bind_4 9.1e-21 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g01688 - - gmx:100820302 514.612