Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g01675 ATGTCTGGTGGGGAGGTAGGTGGTGGGGGTGCTTTTGTGGCATGGGAGGAGCAGGTGATATGCCAGGAGCGTGGGAACCGGGTGATTCACTTCTACCTGAAGGATGCCTTGGGGAATTCGGTGCTGGCCGTTGTGGGGACCGAGAGGAGTGTGAGGCACATGATGTATGTTGTCCATGACCATTTCTTGCAGGCCTATGGATCCACACAGCCCATCAATGCTTGCAAATGGAGGGCGCGGCGAGAGGTTGTCGACTGGCTTACTTGTTTGGTCTCCCGGAATCGGTCACACCATGCAGGTGTACAGTTGGATGATTTAGCTCAAGCTGATGAATCTCACAAGATTTTTGTGCCTGGAATTAATGTCAGTAATAAAATTTTACCTGATAAAATGATTTCTAGGAAACTAAAGTTCCAAAGCTCGGATATTGAATGGTCAGGCATTACTTGGTTTTGTGCTAAACAGCTGAAGCACTACTCGGGATTTTGTAGGAATGGAACTACCATAAATGTTCATTCATTTGTATATATTATGGCTGAAGAAGAAAGCCACTATCTTGGTTACTTGGAAGATATGTATGAAGACAAGAAGAGACAAAAAAAGGTGAAGGTGCGTTGGTTTCACCATGGTCAGGAAGTGAAGCATGTGATTCCACAGCTGAATCTGCAAGAGGGAGAGGTTTTTATCACACCTCATGTTCAGGTGATCAGTGCTGAGTGTGTCAATGGTCCTGCAACTGTTTTGACTCCTAAGCATTATGAGAAATACCTGGCTACTGTGCCTCATACCTCTTTATCTGAGATCCATACGTGCTTTAGGCAGTTTAAAAACAATAAGCTTAAGCCCTTCACACTTACAAAGTTGCGTGGATATGGTAACCAGCCGGTTCTTTCTTGTTTAAATAGTCCTATTCTCTCCAAGAGAAAGGCAAAGTGTGAAAAGTCGCACACAGATGATGAGAACTTCACTCAAGATGATCCTTTAAGGTCCAGCAATAAGAGGATCAGAAGTTCTAAGGATCAAATATTTGAGAGGGGTTTTTCTGGTCTGCAAATCTCTGTTCCTACCAATGAAATGACAAAATGTGGACCAAAATACCCTAGTTTAAAATTAAAACTATCAAGAAAAACGGTGGGTATTAAGGTTATTGGACCAAAGCCTAAACAGTCTTTTCAGGTCGGCGCTAAGATTGAGATTCTTTGTCAAGATAGTGGAATTAGAGGATGCTGGTTTAGGTGTAAAATCTTGAGTGTGTCTCCGAGGCTGCTGAAGGTCCAGTATGATGATTTGCTTGATATAGATGGACCACAGAAACTAGAGGAATGCGTTCTTGCATCTAGAGTGGCAGCTCCTGACAAATTGGGTATGCGATGTTCAGGCCGCTTAACAGTCCGGCCATGCCCTCCTGAATACAATTCAGGTCGTACTTTAGAGATTGGAGCACCAGTGGATGCCTGGTGGTGTGATGGATGGTGGGAAGGTGTCATAACTGCAGTTAATGTCAGTGGAGATGGAATCCTTCAAGTTTATACCCCTGGTGAAGAGAGGTTCCTAAAGGTTGAGCAGAAGAACATTCGGATTTCCCGAGATTGGATCAATAACAGATGGGTTGATATACAAGGAAAGCCTGACATTTGCAGTTATTTAACTTCAAATGTCAGGTCCAGCATCGGGATGTCGGCTAACTCTGCAGTGGTAGACGGATCTATGTCTGATTGCTCTGCTTTAGAAAGTAAATCGTCATCAATTCCTAAAGTTGAAGTAGTTGCTAAGAAGGTTGAGCCAGAATCGTCTGGTTTGGAAACCCCTGTTGATCTGGAAAATATGAAGGGAATAACTCTGAGGGAGCCACTCTATGCCATTCATGAGGACAAGGATAACAACTCTGGTGGTGGCTGTGATGATGAAGCTGACAAGGCTGTGAAGACACTTCTGGCCTTAAATGAACACAAGGATAATAACTCTTGTGGAGGCAGCGATGATGATGACATTGAGGATGATGATAATGTCAATGGTGATGGTGTTGACGATGAGGAGGCCAGTGAGGAAAATTTTGATTGTTCTGAACCAAAACTTGATGCAGCAGAAGCAATACAAGTTGCATGA 2106 0.4368 MSGGEVGGGGAFVAWEEQVICQERGNRVIHFYLKDALGNSVLAVVGTERSVRHMMYVVHDHFLQAYGSTQPINACKWRARREVVDWLTCLVSRNRSHHAGVQLDDLAQADESHKIFVPGINVSNKILPDKMISRKLKFQSSDIEWSGITWFCAKQLKHYSGFCRNGTTINVHSFVYIMAEEESHYLGYLEDMYEDKKRQKKVKVRWFHHGQEVKHVIPQLNLQEGEVFITPHVQVISAECVNGPATVLTPKHYEKYLATVPHTSLSEIHTCFRQFKNNKLKPFTLTKLRGYGNQPVLSCLNSPILSKRKAKCEKSHTDDENFTQDDPLRSSNKRIRSSKDQIFERGFSGLQISVPTNEMTKCGPKYPSLKLKLSRKTVGIKVIGPKPKQSFQVGAKIEILCQDSGIRGCWFRCKILSVSPRLLKVQYDDLLDIDGPQKLEECVLASRVAAPDKLGMRCSGRLTVRPCPPEYNSGRTLEIGAPVDAWWCDGWWEGVITAVNVSGDGILQVYTPGEERFLKVEQKNIRISRDWINNRWVDIQGKPDICSYLTSNVRSSIGMSANSAVVDGSMSDCSALESKSSSIPKVEVVAKKVEPESSGLETPVDLENMKGITLREPLYAIHEDKDNNSGGGCDDEADKAVKTLLALNEHKDNNSCGGSDDDDIEDDDNVNGDGVDDEEASEENFDCSEPKLDAAEAIQVA* 702
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g01675 701 PANTHER AGENET DOMAIN-CONTAINING PROTEIN-RELATED 389 585 - -
Lapu6g01675 701 SMART BAH_4 167 286 IPR001025 GO:0003682
Lapu6g01675 701 MobiDBLite consensus disorder prediction 648 701 - -
Lapu6g01675 701 Gene3D - 134 284 IPR043151 -
Lapu6g01675 701 MobiDBLite consensus disorder prediction 315 335 - -
Lapu6g01675 701 CDD Tudor_Agenet_AtDUF_rpt1_3 391 469 - -
Lapu6g01675 701 Pfam Agenet domain 394 469 IPR008395 -
Lapu6g01675 701 ProSiteProfiles BAH domain profile. 167 286 IPR001025 GO:0003682
Lapu6g01675 701 MobiDBLite consensus disorder prediction 659 684 - -
Lapu6g01675 701 SMART agenet_At_2 475 533 IPR014002 -
Lapu6g01675 701 SMART agenet_At_2 389 454 IPR014002 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g01675 Lapu-Chr6 16605198 16615153 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu6g01675 403 531 PHD Transcription Factor Family AT5G58610 28.571 1.24e-07 53.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g01675 - - vun:114188137 1237.63
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu6g01675 6 16605198 16615153 Lapu6g01675 6 16605198 16615153 ECH