Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g01670 ATGCAAACGTCCCAGAAACACCCAACTTCTTCTGGTATCCATTTATACCACCAATCTGCGCAAGACATTAATCCCTACACTCGTTACCAAGTATTGCCCCACAATTCTTGCCATGAAATCCATGATAACAGCAGTCAGGGGACCACTATTTCGTTTGAACCCTGCAAGGAGCAATACTTTACCCTTGAATCATCCCCAGCAATCAATGATCTCATAGGTTGTGATTCTCCTTCCTGTGCTAGTGTATCATCCAATTCCAATAGGAGTCCTTTTTCTCCACAAGCTTCTCATTCATACCATTCAGACCAGCATCAGTCATCTGACAACAACTATGGATCGCCAACAAGTGCACACTCTAGTGCTGATGATAGCTATGAATTGAAGCACAAGCTTAGAGAACTTGAGATTTCATTGTTGGGGCCTGATTCAGATATTGTTGACAGTTGCCACTGCTGCTACAAGGGTGGACACCACGGAGCATCTCCAATGGCTAAATACAATTGGGGTCAGATTGTAGAAATGATTCCAAAACTAGACTTGAAAGAAGTCCTCAATCGGTGTGCACAGGCTGTATCTGATGAGGATAGTGAAACAGTGGTTGGATTTATGAATAGTGTATTGCCAAAGATGGTATCAGTTGGCGGTGATCCAATCCAGAGGTTAGGGGCCTACATGTTAGAGGGTTTAAGAGCAAGGTTGGAATCTTCAGGGAGCCTAATCTACAAGGCCTTGAAATGTGAACAACCAGCAAGCAAAGATCTCATGAGTTATATGCACATCCTGTACCAGATTTGCCCATATTGGAAGTTTGCTTACGTATCTGCCAACGTTGTCATTGGAGAAGCAATGCTAAATGAATCAAGGATTCACATAATTGACTTCCAAATTGCACAGGGCACTCAGTGGATGATGCTTATTCAGGCTCTTGCATCTCGTCCAGGTGGACCACCTTTCATTCGTGTAACTGGTGTCGATGATTCTGAATCCTTTCATGCAAGAGGTGGAGGACTTCAAATTGTAGGAAAACACCTATCTGATTATGCCAAATCTTGTAGAGTGCCATTTGAGTTCCACAGTGCTGCAATGTCTGGAAGCGAGGTTGAACTAGAAAACCTTGTGATTCAACCCGGGGAAGCTCTAGCTGTGAATTTCCCTTTTGTTTTGCACCACATGCCAGATGAGAGTGTGAGCACAGAGAACCATAGGGACAGGCTATTAAGACTGGTGAGGAGCTTGTCACCCAAGGTTGTGACCCTTGTTGAGCAAGAATCCAACACCAACACTTCACCCTTTTTCCAAAGGTTTGTTGAGACTTTGAGTTATTACAGTGCTATGTTTGAGTCAATAGATGTGGCCCTTCCCAGAGAGGATAAGAAAAGGATCAGTGCAGAACAACACTGTGTGGCTCGTGACATTGTTAACATGATAGCTTGTGAGGGCCCTGAGAGGGTGGAAAGGCATGAACTCTTCGGAAAGTGGAGGTCAAGATTTTCAATGGCTGGTTTTTCACCATGCCCTTTGAGTTCCTCAGTCACTGATGCAGTTAGAAACATGTTAAAAGATTTCAATGGAAATTATAGGCTAGAACATAGAGATGGTGCTCTCTATCTAGGATGGAAGAAAAGAGCCATGTGTACATCTTCTGCTTGGAGATGTTACTGA 1662 0.4368 MQTSQKHPTSSGIHLYHQSAQDINPYTRYQVLPHNSCHEIHDNSSQGTTISFEPCKEQYFTLESSPAINDLIGCDSPSCASVSSNSNRSPFSPQASHSYHSDQHQSSDNNYGSPTSAHSSADDSYELKHKLRELEISLLGPDSDIVDSCHCCYKGGHHGASPMAKYNWGQIVEMIPKLDLKEVLNRCAQAVSDEDSETVVGFMNSVLPKMVSVGGDPIQRLGAYMLEGLRARLESSGSLIYKALKCEQPASKDLMSYMHILYQICPYWKFAYVSANVVIGEAMLNESRIHIIDFQIAQGTQWMMLIQALASRPGGPPFIRVTGVDDSESFHARGGGLQIVGKHLSDYAKSCRVPFEFHSAAMSGSEVELENLVIQPGEALAVNFPFVLHHMPDESVSTENHRDRLLRLVRSLSPKVVTLVEQESNTNTSPFFQRFVETLSYYSAMFESIDVALPREDKKRISAEQHCVARDIVNMIACEGPERVERHELFGKWRSRFSMAGFSPCPLSSSVTDAVRNMLKDFNGNYRLEHRDGALYLGWKKRAMCTSSAWRCY* 554
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g01670 553 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 113 544 IPR005202 -
Lapu6g01670 553 MobiDBLite consensus disorder prediction 85 124 - -
Lapu6g01670 553 MobiDBLite consensus disorder prediction 85 121 - -
Lapu6g01670 553 ProSiteProfiles GRAS family profile. 171 551 IPR005202 -
Lapu6g01670 553 Pfam GRAS domain family 180 551 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g01670 Lapu-Chr6 16550118 16553761 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu6g01670 1 551 GRAS Transcription Factor Family AT4G17230 58.559 0.0 627
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Lapu6g01670 GRAS 5.4e-127 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g01670 - - gmx:100819190 973
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu6g01670 6 16550118 16553761 Lapu6g01670 6 16550118 16553761 ECH
Lapu3g00082 3 1116606 1126714 Lapu6g01670 6 16550118 16553761 PCT