Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g01645 ATGTTTGGAAATCAACATTCGGGAGGAAGATTTGTCATGACTGTATACTCTGACAAGCTTCATATTATTGTTCACAGACACACTTGTTTTCTAGGTTCAATGGCGGGGTCATGTTTCCACGGACTTAGGCTAAGGATGTCTAAGAGTAAACCTTTACCAGACCCGTCATCTGCCTCCAAGTCACGGTTGGAGAGTGACACGGAGAACATGGAAAGGAAGAGATTTGATAGCATGGAATCGTGGTCCATGATATTGGACTCAATGGATACATGGGAGGCTTCAAAGGAGGACCAGGAGGGGGAGCATGAGGAGTGGACTGCAGACCTATCACAGCTTTTTATTGGTAACAAGTTTGCTTCTGGAGCTCACAGTCGAATTTACCGTGGAGTCTACAAGCAGAGAGCTGTTGCTGTGAAAATGGTGAGGATTTCATCAGAGGATGAGGAGAAAAAGGCCTTGCTAGAGGAGCAATTTAACTCTGAAGTGGCTTTGCTTTCACGTCTCTTCCATTTTAACATAGTGCAGTTTATTGCAGCATGTAAAAAACCGCCTGTGTACTGTATCATAACAGAATACATGTCACAAGGGAATCTGAGGATGTATCTGAACAAGAAAGAGCCATACTCACTCTCAATGGAAACAATACTAAGGTTGGCTCTAGATATATCAAGGGGCATGGAGTACCTTCATTCACAAGGTGTGATTCACAGAGACTTGAAGTCAAGTAATTTGCTCCTCGACGATGATATGAGGGTTAAGGTGGCGGATTTCGGCACATCATGTCTTGAAACAAGATGCCGGAAAAGCAAAGGGAACTCGGGAACATATCGTTGGATGGCACCAGAGATGGTTAAAGAAAAACCTTACACTCGAAAAGTTGATGTGTACAGTTTTGGTATTGTGCTTTGGGAGCTCACTACTTCACTACTTCCTTTCCAAGGAATGACCCCAGTGCAAGCTGCTTTTGCTGTGGCTGAGAAGAATGAAAGGCCTCCTCTGCCAGCTAGTTGTCAACCAGCACTAGCACATCTGATAAAGCGGTGTTGGTCAGCAAACCCCTCAAAACGACCAGATTTCAGTGATATTGTGTCTACTTTGGAGAAGTACGATGAGTGTGTGAAGGAGGGCCTACCAATGAGTCATCATCATTCAGGGTTAATCAGCAGCAATGTAATTATTGAACGCTTAAAAGGCTGTGTATCAATGACCTCCTCCATACCTGTATATGCTTGA 1233 0.4404 MFGNQHSGGRFVMTVYSDKLHIIVHRHTCFLGSMAGSCFHGLRLRMSKSKPLPDPSSASKSRLESDTENMERKRFDSMESWSMILDSMDTWEASKEDQEGEHEEWTADLSQLFIGNKFASGAHSRIYRGVYKQRAVAVKMVRISSEDEEKKALLEEQFNSEVALLSRLFHFNIVQFIAACKKPPVYCIITEYMSQGNLRMYLNKKEPYSLSMETILRLALDISRGMEYLHSQGVIHRDLKSSNLLLDDDMRVKVADFGTSCLETRCRKSKGNSGTYRWMAPEMVKEKPYTRKVDVYSFGIVLWELTTSLLPFQGMTPVQAAFAVAEKNERPPLPASCQPALAHLIKRCWSANPSKRPDFSDIVSTLEKYDECVKEGLPMSHHHSGLISSNVIIERLKGCVSMTSSIPVYA* 411
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g01645 410 ProSitePatterns Serine/Threonine protein kinases active-site signature. 234 246 IPR008271 GO:0004672|GO:0006468
Lapu6g01645 410 FunFam Serine/threonine-protein kinase isoform 1 102 194 - -
Lapu6g01645 410 CDD STKc_MAP3K-like 119 366 - -
Lapu6g01645 410 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 104 369 - -
Lapu6g01645 410 SMART serkin_6 112 373 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu6g01645 410 Gene3D Phosphorylase Kinase; domain 1 101 194 - -
Lapu6g01645 410 ProSiteProfiles Protein kinase domain profile. 112 369 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu6g01645 410 Pfam Protein tyrosine and serine/threonine kinase 114 366 IPR001245 GO:0004672|GO:0006468
Lapu6g01645 410 MobiDBLite consensus disorder prediction 48 72 - -
Lapu6g01645 410 PRINTS Tyrosine kinase catalytic domain signature 228 246 IPR001245 GO:0004672|GO:0006468
Lapu6g01645 410 PRINTS Tyrosine kinase catalytic domain signature 274 284 IPR001245 GO:0004672|GO:0006468
Lapu6g01645 410 PRINTS Tyrosine kinase catalytic domain signature 293 315 IPR001245 GO:0004672|GO:0006468
Lapu6g01645 410 PRINTS Tyrosine kinase catalytic domain signature 190 203 IPR001245 GO:0004672|GO:0006468
Lapu6g01645 410 PRINTS Tyrosine kinase catalytic domain signature 337 359 IPR001245 GO:0004672|GO:0006468
Lapu6g01645 410 FunFam serine/threonine-protein kinase HT1 195 387 - -
Lapu6g01645 410 Gene3D Transferase(Phosphotransferase) domain 1 195 389 - -
Lapu6g01645 410 SUPERFAMILY Protein kinase-like (PK-like) 88 366 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g01645 Lapu-Chr6 16321511 16326684 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu6g01645 34 401 MAP Kinase Kinase Kinase AT1G62400 78.628 0.0 613
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Lapu6g01645 PK_Tyr_Ser-Thr 5.8e-67 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g01645 - - aprc:113845847 701.434