Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g01632 ATGGAGCGTTTGGCTAGGTCAGCTCGAGTGTGGCGTTGGCATTGGCGTTCGTTTTCCTCTTTTCAAACCCTAACTTCTCGCTCCTCAACTCTTTCTAAATATCCTAAATTTGCGTCTTCTTGGTTTGCCTCTTCCGATATTTCGATTGCCAGAGTCTTGCGCGAGGACTATTCCCTGCTTCCGGTTTTCTTAGCCGGTGTTTTTGGAACTGGATTGGTGGGAGTGGCTTACGCGGATAATGGTGCTGTGGATGTCCAAGAAAGAGCCAAGCAGGAACGCCAGCGAATTGAGGAGTTGATTAGAAGTAGAGGAATTCGATATGGTTCTTATCCTTCCTTCTCTGTGGCCGTTAAAGGCCAAAAGGTCAGTATTAAGTTTCAAATTCCTCATGGTTGTGATATTTCACAACTTATTGCAAATCTTACCGCACATCTTGGAAGGAAAGCTGAAGGCCATGGAGGTGGTTCAGACATGTTATTACGAGCTTGGAGCAGCCCAGTTGCTTGGCAACTTACCCTTACTTATCCATCAGAACAAAAACATATTCCAGGGAATGGTATTTCTTCAAAAGATATAAATGCAGATGACGCAGATCTATGTATACTCATATTTCATTCTCTCGTTGGCTTAGATAAAGCTGAGATTGAATTCATTAAGCAAGGGGATTTGAGTCCTGAAGAGCTTGATGCTTTCATTTCTGTTTTACAATTATCTGGTAACAAGTTGGGACAAAGAAGCACCCTGGAAAGAAAACCAAAGGAAGAGAATGAAAAGGTGCCATCTGTAGATAAATCTATTTCTGATCTTGAGGGTATGGGAGTGAGAATTTATGGACTTGATGAACCCGTAGGTATATCTAAAGATGGTGAGGTATCATGGGACAACATTGCTGGTTATGAACATCAGAAACGATTAATAGAAGATACAATACTATTGGCTTTGCATAGTCCTGAAGTATATGACGATATTGCCCGAGAAACTCGTCATAAGTTTGAGTCAAACAGACCTCGAGCTGTGCTATTCGAAGGTCCACCTGGTACAGGGAAAACATCCTGTGCTCGTGTTATTGCCAATCAAGCGGGTGTCCCTTTGCTATATGTTCCACTTGAGGCAATAATGTCTGAGTTCTATGGTAAAAGTGAACGTCTTCTAGGGAAAGTGTTTTCGCTTGCAAACAATCTTCCGAATGGTGCTATAATATTTCTGGACGAGATTGATTCTTTTGCTGCTGCGCGTGACAATGAAATGCATGAAGCTACACGTAGAATATTGTCAGTCTTGTTGAGACAGATAGATGGCTTTGAGCAGGACAAGAAAGTAGTAGTCATTGCTGCCACAAATAGAAAGGAAGACCTTGATCCGGCATTAATCAGTCGGTTTGATAGTATGATCGCTTTTGGTTTACCTGATCATCGGAATCGTCAAGAAATAGCATCCAAATATGCAAAGCACCTGTCCAAAGCCGAACTAGATGAACTTGCAAGAGTTACAGAAGATATGTCTGGAAGAGACATTAGAGATGTTTGTCAGCAAGCAGAACGATCGTGGGCGTCAAAGATTATTCGAGGGCAAGTTCCTAAAGAGGGGGAAACAGCGAAGCTTCCAGCTTTGCAAGAATATATAGAATGCGCCAGGAGTCGACAGGAGGCGCTGCGTAGTGCTGCCGCAAACAGGAAGTTCCGAAGCTCTTCCCGCTCCAATATTCTAAGCGACTGA 1716 0.4301 MERLARSARVWRWHWRSFSSFQTLTSRSSTLSKYPKFASSWFASSDISIARVLREDYSLLPVFLAGVFGTGLVGVAYADNGAVDVQERAKQERQRIEELIRSRGIRYGSYPSFSVAVKGQKVSIKFQIPHGCDISQLIANLTAHLGRKAEGHGGGSDMLLRAWSSPVAWQLTLTYPSEQKHIPGNGISSKDINADDADLCILIFHSLVGLDKAEIEFIKQGDLSPEELDAFISVLQLSGNKLGQRSTLERKPKEENEKVPSVDKSISDLEGMGVRIYGLDEPVGISKDGEVSWDNIAGYEHQKRLIEDTILLALHSPEVYDDIARETRHKFESNRPRAVLFEGPPGTGKTSCARVIANQAGVPLLYVPLEAIMSEFYGKSERLLGKVFSLANNLPNGAIIFLDEIDSFAAARDNEMHEATRRILSVLLRQIDGFEQDKKVVVIAATNRKEDLDPALISRFDSMIAFGLPDHRNRQEIASKYAKHLSKAELDELARVTEDMSGRDIRDVCQQAERSWASKIIRGQVPKEGETAKLPALQEYIECARSRQEALRSAAANRKFRSSSRSNILSD* 572
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g01632 571 Pfam ATPase family associated with various cellular activities (AAA) 339 467 IPR003959 GO:0005524|GO:0016887
Lapu6g01632 571 CDD RecA-like_protease 324 466 - -
Lapu6g01632 571 Gene3D - 290 468 IPR027417 -
Lapu6g01632 571 ProSitePatterns AAA-protein family signature. 440 459 IPR003960 GO:0005524|GO:0016887
Lapu6g01632 571 Coils Coil 82 102 - -
Lapu6g01632 571 Gene3D - 469 539 - -
Lapu6g01632 571 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 290 519 IPR027417 -
Lapu6g01632 571 PANTHER 26S PROTEASOME REGULATORY SUBUNIT 262 514 - -
Lapu6g01632 571 SMART AAA_5 335 470 IPR003593 GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g01632 Lapu-Chr6 16159908 16166614 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu6g01632 335 535 Calmodulin-binding Proteins AT3G56690 36.058 2.05e-28 119
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g01632 - - gmx:100803362 998.808