Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g01623 ATGGATATGCAAGCATCAAATGAATTCCTTGCAGAACTAAAGGTTCTAACGCATGTCCATCACTTGAACTTGGTGCGGTTAATAGGTTATTGTGTTGAGGGCTCCTTATTTTTGGTTTATGAGTATATTGAGAACGGCAATTTAAGCCAACATTTGCGAGGCTCAGGGAGGGATCCGTTAACATGGGGAGCTAGAGTGCAAATTGCCCTTGATGCAGCAAGAGGATTGGAATACATCCATGAGCATACAGTTCCTGTCTACATCCATAGAGATATTAAATCAGCAAACATTTTGATAGACAAAAACTTTCGTGCAAAGGTTGCAGATTTTGGTCTCACAAAATTGACAGAGTACGGTAGTTCTTCATTACACACGCGTCTTGTTGGCACCTTTGGTTATATGCCTCCAGAATATGCACAGTATGGTGATGTTTCCTCCAAAATAGACGTATATGCTTTTGGAGTTGTTCTCTATGAACTCATATCAGGCAAGGAAGCCATCGTCAAGACAAAGGACCCTGAGAGTGAATCAAAAGGACTAGTTGCCTTGTTTGAAGAAGTTCTTGGTCTCTCAGATCCAAAAGAACATCTTCGTCAACTTGTTGACCCTAGACTTGGTCACAATTATCCTCTTGACCCCGTGTTTAAGGTGTCTCAGCTTGCGAAAGCATGTACACATGAAAACCCTCAACTTAGGCCAAGCATGAGATCAATTGTGGTTGCCTTAATGACACTTTCATCTACAACTGAGGATTGGGATGTTGGTTCCTTCTATGAAAACCAAGCTTTAATGCACCTTATGTCTGGAAGGTAG 813 0.4157 MDMQASNEFLAELKVLTHVHHLNLVRLIGYCVEGSLFLVYEYIENGNLSQHLRGSGRDPLTWGARVQIALDAARGLEYIHEHTVPVYIHRDIKSANILIDKNFRAKVADFGLTKLTEYGSSSLHTRLVGTFGYMPPEYAQYGDVSSKIDVYAFGVVLYELISGKEAIVKTKDPESESKGLVALFEEVLGLSDPKEHLRQLVDPRLGHNYPLDPVFKVSQLAKACTHENPQLRPSMRSIVVALMTLSSTTEDWDVGSFYENQALMHLMSGR* 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g01623 270 PIRSF ILK 204 258 - -
Lapu6g01623 270 PIRSF ILK 1 187 - -
Lapu6g01623 270 FunFam PTI1-like tyrosine-protein kinase 3 43 256 - -
Lapu6g01623 270 SMART serkin_6 1 244 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu6g01623 270 ProSitePatterns Serine/Threonine protein kinases active-site signature. 87 99 IPR008271 GO:0004672|GO:0006468
Lapu6g01623 270 ProSiteProfiles Protein kinase domain profile. 1 245 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu6g01623 270 SUPERFAMILY Protein kinase-like (PK-like) 3 251 IPR011009 -
Lapu6g01623 270 Pfam Protein tyrosine and serine/threonine kinase 4 241 IPR001245 GO:0004672|GO:0006468
Lapu6g01623 270 PANTHER CHITIN ELICITOR RECEPTOR KINASE 1-RELATED 1 256 IPR044812 GO:0019199|GO:0045087
Lapu6g01623 270 Gene3D Transferase(Phosphotransferase) domain 1 44 254 - -
Lapu6g01623 270 Gene3D Phosphorylase Kinase; domain 1 1 43 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g01623 Lapu-Chr6 16085136 16091544 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu6g01623 1 270 Receptor kinase-like Gene Family AT3G21630 70.370 2.22e-134 391
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Lapu6g01623 PK_Tyr_Ser-Thr 1.5e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g01623 - K13429 gmx:100802308 514.227