Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g01598 ATGGCTGAGGCTACACAATCTAATGCTGAGTTGTTGGAGTGGCCAAAGAAAGATAAGCGCCGCTTCTTGCATGCTGTGTACCGTGTTGGTGATCTTGATCGCACCATTAAGTTTTACACTGAATGTTTTGGGATGAAGCTTTTGAGGAAAAGAGATGTTCCAGAAGAGAAATTTGCCAATGCTTTTCTTGGATTTGGCCCCGAACAATCCCATTTTGTTGTGGAATTGACTTATAATTATGGGGTGACCTCATATGATATTGGAACTGGCTTTGGACATTTTGCCATTGCAACTCCAGATGTTTACAAATTGGTGGAAAACATCCGGGCGAAGGGTGGAACTGTCACTAGGGAGCCTGGTCCAGTTAAGGGTGGAACATCTGTTATTGCCTTTGCGAAGGATCCTGACGGTTATATTTTTGAGCTCATCCAAAGACCTTCAACCCCTGAGCCATTGTGCCAAGTAATGCTTCGTGTTGGTGATTTAGAGCGTTCAATAAAATTTTATGAAAAGGCTCTGGGTTTGAGGGTCGTAAAGAGGGCTGATAGACCTGAACAAAAGTACACTATAGCTATGCTTGGGTACGCAGAGGAGCAAGAGACAACAGTGTTGGAGCTTACATATAACTATGGTGTCACTGAATACACCAAGGGAAATGCTTATGCTCAGGTTGCTATAGGTACGGACGATGTATACAAGAGTGCTGAGGTTGTGAACATAGTCACACAAGAGCTTGGAGGGAAGATTACTCGGCAACCAGGGCCAATTCCTGGCCTTAACACAAAGATCACTTCTTTCTTAGACCCTGATGGATGGAAAACTGTTTTGGTTGACAATCAAGATTTTCTGAAGGAACTAGAGTGA 864 0.4352 MAEATQSNAELLEWPKKDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKFANAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIATPDVYKLVENIRAKGGTVTREPGPVKGGTSVIAFAKDPDGYIFELIQRPSTPEPLCQVMLRVGDLERSIKFYEKALGLRVVKRADRPEQKYTIAMLGYAEEQETTVLELTYNYGVTEYTKGNAYAQVAIGTDDVYKSAEVVNIVTQELGGKITRQPGPIPGLNTKITSFLDPDGWKTVLVDNQDFLKELE* 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g01598 287 ProSiteProfiles Vicinal oxygen chelate (VOC) domain profile. 151 279 IPR037523 -
Lapu6g01598 287 SUPERFAMILY Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 20 149 IPR029068 -
Lapu6g01598 287 ProSitePatterns Glyoxalase I signature 2. 88 100 IPR018146 GO:0004462|GO:0046872
Lapu6g01598 287 SUPERFAMILY Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 152 279 IPR029068 -
Lapu6g01598 287 ProSitePatterns Glyoxalase I signature 1. 154 175 IPR018146 GO:0004462|GO:0046872
Lapu6g01598 287 Gene3D - 1 147 IPR029068 -
Lapu6g01598 287 ProSiteProfiles Vicinal oxygen chelate (VOC) domain profile. 21 145 IPR037523 -
Lapu6g01598 287 Gene3D - 148 287 IPR029068 -
Lapu6g01598 287 FunFam Lactoylglutathione lyase 148 287 - -
Lapu6g01598 287 NCBIfam lactoylglutathione lyase 22 146 IPR004361 GO:0004462|GO:0046872
Lapu6g01598 287 Pfam Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 154 273 IPR004360 -
Lapu6g01598 287 Pfam Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 23 142 IPR004360 -
Lapu6g01598 287 CDD GlxI_Ni 23 143 - -
Lapu6g01598 287 PANTHER LACTOYLGLUTATHIONE LYASE 4 287 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g01598 Lapu-Chr6 15871745 15875860 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu6g01598 154 278 Calmodulin-binding Proteins AT1G08110 29.333 9.37e-12 62.0
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu6g01598 6 15871745 15875860 Lapu6g01598 6 15871745 15875860 ECH
Lapu6g01598 6 15871745 15875860 Lapu3g00130 3 1533792 1537501 ECH
Lapu3g00130 3 1533792 1537501 Lapu6g01598 6 15871745 15875860 PCT