Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g01578 ATGATCTCTTTAACGAGATGCTCAGCATCATCGCTCACTTGTTCTGCTTTCTCAACCACAAAACTTCCCCTTGCAAGGCCCCAACTTCTCACATTTCCAACCATTAACAACGTTGAACAAAACACTAGTCCCTCTCAGTTGTGTTCCCAGAAACCGCTCTACCTTTCATCTACAGAGAACTTGGCATTGGTGAAGAGAAAGAGGGTGACGGAGTGCCACGCCTATGAGGCTGACAGGTCACGCCCCATAGAGATTAACATTGAGCTGCCGGGTGAAGATGCTGCTCAGAGGGTGAAGATTGGGGTGTATTTTGCCACCTGGTGGGCTTTGAATGTGGTGTTCAACATCTACAACAAGAAGGTTTTGAATGCTTTTCCTTACCCCTGGCTCACCTCCACTCTGTCCCTTGCTGCTGGCTCCCTCATGATGTTAATCTCCTGGGCCACCAGAGTTGCTGAGGTCCCAAAAGTTAACTCCGACTTCTGGAAGGCCTTATTTCCTGTTGCGGTGGCACACACAATTGGGCATGTTGCTGCAACTGTGAGCATGTCCAAGGTTGCTGTCTCTTTCACTCATATCATCAAGAGTGGAGAGCCTGCTTTCAGTGTCCTGGTGTCAAGGTTCTTGCTTGGAGAAGCATTCCCAATGCAGGTTTATCTGTCACTGGCGCCAATTATTGGTGGTTGTGCACTAGCTGCTGTGACTGAGCTCAATTTCAATATGATTGGCTTCATGGGGGCTATGATATCAAATTTGGCATTTGTCTTCAGGAATATATTCTCAAAGAAAGGAATGAAAGGGATGTCTGTTAGTGGAATGAACTACTATGCCTGTCTTTCCATAATGTCTCTGTTGATCCTCACACCTTTTGCCGTTGCTGTGGAGGGCCCCAAGGTTTGGGCTGCCGGATGGCAATCAGCTGTGTCTCAAATTGGTCCCAATTTTGTATGGTGGGTAGCTGCTCAGAGTGTCTTCTACCACTTGTACAATCAAGTCTCTTACATGTCTCTTGATCAGATTTCTCCCTTAACATTCAGCATTGGAAACACAATGAAGAGGATTTCGGTCATTGTCTCTTCTATTCTTATCTTCCACACGCCTGTTCAGCCCATCAATGCTCTTGGTGCTGCCATTGCAATTCTTGGCACCTTCCTCTATTCACAGGCTAAACAGTAA 1176 0.4668 MISLTRCSASSLTCSAFSTTKLPLARPQLLTFPTINNVEQNTSPSQLCSQKPLYLSSTENLALVKRKRVTECHAYEADRSRPIEINIELPGEDAAQRVKIGVYFATWWALNVVFNIYNKKVLNAFPYPWLTSTLSLAAGSLMMLISWATRVAEVPKVNSDFWKALFPVAVAHTIGHVAATVSMSKVAVSFTHIIKSGEPAFSVLVSRFLLGEAFPMQVYLSLAPIIGGCALAAVTELNFNMIGFMGAMISNLAFVFRNIFSKKGMKGMSVSGMNYYACLSIMSLLILTPFAVAVEGPKVWAAGWQSAVSQIGPNFVWWVAAQSVFYHLYNQVSYMSLDQISPLTFSIGNTMKRISVIVSSILIFHTPVQPINALGAAIAILGTFLYSQAKQ* 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g01578 391 NCBIfam Tpt phosphate/phosphoenolpyruvate translocator 99 390 IPR004696 GO:0016020|GO:0022857|GO:0055085
Lapu6g01578 391 SUPERFAMILY Multidrug resistance efflux transporter EmrE 291 388 - -
Lapu6g01578 391 SUPERFAMILY Multidrug resistance efflux transporter EmrE 141 234 - -
Lapu6g01578 391 Pfam Triose-phosphate Transporter family 99 387 IPR004853 -
Lapu6g01578 391 PANTHER SOLUTE CARRIER FAMILY 35 99 390 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g01578 Lapu-Chr6 15617604 15620542 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu6g01578 36 391 Antiporters AT1G61800 79.775 0.0 579
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g01578 K15283 K05350 gmx:100804205 711.064
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu6g01578 6 15617604 15620542 Lapu6g01578 6 15617604 15620542 ECH