Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g01532 ATGATTGTAAAGGAGCATTTTGTTGGTACTGAGCTGGCAATGAATAATGCTATCGTGGAGGAGGAAATAGATTTTTCTTGTGATCCGTACATAGGGTTAGAATTTGACACAGCAGATGAAGCACTAAAGTTTTACACTTCATATGCAAATCGAACAGGATTTAAAGTTCGGATTGGTCAGCTATATCGATCAAGAACTGATGGGTCAGTTTCTTCTCGAAGATTTGTGTGCTCAAAGGAGGGACATCAACTCAGTTCAAGAACAGGCTGTCCAGCATTCATAAGGGTGCAAATAAATGGTTCTGGAAAGTGGGTGATTGATCATTTTCATAAGGACCATAATCACAATCTTGAAATCAGTGGTGAAAACTGCACTCCAACATTACAACAGAAAGGTGGTACAGTTGTCAGCTCTCTTACTGAGTTTACTCGTAGGCCAAGGAAGAAATTGCTCGAAGAAGCCAATAATGAATCCTCTTGTCCCTTTGGAATTATTGATTTCAAGCGTCTGAGAAAGGAAGAACTTGAAGGACAGCCCAAGACCGAACCTTATGTGGGCCAAGAATTCAGTTCACCTAATGAAGCCTACCAATTTTATCATGCATATGCAGCACATTTGGGTTTTGGAGTTCGAATTGGTCAATTGTTTCGTTCTAAGAATGATGGATTGATTACATCCCGCAGATTTGTTTGCTCTAAAGAGGGGTTCCAGCACCCTTCAAGAGTTGGCTGCGGGGCTTATTTAAGGATTAAGAGACAACCATCAGGAAAATGGACAGTGGACCGCCTCCGAAAAGATCATAACCATGATCTGGACTCTGAAAAAGAAGGCAGGACAAAAGGTCTTCCTGCTTCTAATATTCTGAATGACGATGCAGATACTGGATTTGTAAATGGTGACTTGTTTCGAATCGATAACTACCCTGTCCCTAGAGGAGGTAGGCAAAATCACATTAGAAGTGAATGGTACAGCATTCTTTTAGAGTATTTTCAATCAAGACAAACTGAAGATACTGGATTCTTTTATGCTGTGGAAGTTGACAATGGTAATTGCATGAGCATATTTTGGGCGGATGGCAGATCTAGATATTCATGTAGTCAGTTTGGTGACGTCCTTGTCTTAGACACATCATACCGAAAAACTGTCTATTTGGTGCCTTTTGCTACTTTTGTTGGAGTCAATCATCACAAGCAACCTGTGCTTCTTGGATGTGCTTTAGTTGCTGATGAATCTGAAGAATCTTTCACTTGGTTGTTTCAGACATGGCTTAGGGCAATGTCTGGCCGGCAGCCTCTGACAGTTATTGCTGATCAAGATATTGCAGTCCAAAGGGCAATAGCAAAAGTCTTTCCTGTAACCTCTCATCGCTTTTCGTTGTGGCAAATTAAGGCAAAGGAACAAGAGAACATGGGTCTGATGGGTGATGGCTTTACAAAAGACTATGAAAAGTGTGTTTACCAGAGTCAGACAGTTGATGAATTTGATGCCACGTGGAACGTGCTGCTCAACAAATATGGATTGAAGGACAATGCTTGGTTAAAAGAAATGTATGAGAAGCGAGCATCTTGGGTTCCATTGTATTTGAAGGGCACATTTTTTGCTGGCATTCCCATGAATGAAAGCCTTGATTCATTCTTTGGTGCACTTTTAAATGCCCAGACACCTCTCATGGAGTTTATTCCTCGGTACGAGAGGGGTCTTGAGCGACGCCGTGAGGAAGAAAGAAAAGAGGATTTTAATACTTCTAATTTTCAACCCATTTTGCAAACGAAAGAACCAGTGGAAGAACAATGCAGAAGGCTTTACACTCTTGCTGTATTCAAGGTATTTCAAAAAGAGCTATTGCAGTGCTTTAGCTATCTTGGGTTTAAAATATTTGAGGAAGGGGGCCTGAGCAGATATATGGTGCGTAGGTGTGGAAATGATATGGAGAAACATGTAGTTACATTTAATGCATCAAATCTCAGCATTAGTTGTAGCTGTCAGATGTTTGAGTATGATGGTGTTCTTTGTAGACACGTGTTGAGGGTTTTCCAGATATTACAATTAAGAGAAGTTCCTTCTCGCTACATCTTACACCGGTGGACTAGAAATGCCGAGGATGGTGTCTTTCCTGACATAGAATCATGGAGTAGCTCTCAGGAACTTAAAAATTTGATGCTATGGAGTCTAAGAGAAACTGCATCTAAATACATAGATGCTGGTGCAACATCCATTGAAAAGTATAAACTTGCCTATGAAATTTTGCGAGAGGGTGGGAGAAAGCTTTGTTGGCACAGGTGA 2283 0.4087 MIVKEHFVGTELAMNNAIVEEEIDFSCDPYIGLEFDTADEALKFYTSYANRTGFKVRIGQLYRSRTDGSVSSRRFVCSKEGHQLSSRTGCPAFIRVQINGSGKWVIDHFHKDHNHNLEISGENCTPTLQQKGGTVVSSLTEFTRRPRKKLLEEANNESSCPFGIIDFKRLRKEELEGQPKTEPYVGQEFSSPNEAYQFYHAYAAHLGFGVRIGQLFRSKNDGLITSRRFVCSKEGFQHPSRVGCGAYLRIKRQPSGKWTVDRLRKDHNHDLDSEKEGRTKGLPASNILNDDADTGFVNGDLFRIDNYPVPRGGRQNHIRSEWYSILLEYFQSRQTEDTGFFYAVEVDNGNCMSIFWADGRSRYSCSQFGDVLVLDTSYRKTVYLVPFATFVGVNHHKQPVLLGCALVADESEESFTWLFQTWLRAMSGRQPLTVIADQDIAVQRAIAKVFPVTSHRFSLWQIKAKEQENMGLMGDGFTKDYEKCVYQSQTVDEFDATWNVLLNKYGLKDNAWLKEMYEKRASWVPLYLKGTFFAGIPMNESLDSFFGALLNAQTPLMEFIPRYERGLERRREEERKEDFNTSNFQPILQTKEPVEEQCRRLYTLAVFKVFQKELLQCFSYLGFKIFEEGGLSRYMVRRCGNDMEKHVVTFNASNLSISCSCQMFEYDGVLCRHVLRVFQILQLREVPSRYILHRWTRNAEDGVFPDIESWSSSQELKNLMLWSLRETASKYIDAGATSIEKYKLAYEILREGGRKLCWHR* 761
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g01532 760 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 16 124 IPR031052 GO:0006355
Lapu6g01532 760 ProSiteProfiles Zinc finger SWIM-type profile. 646 682 IPR007527 GO:0008270
Lapu6g01532 760 Pfam MULE transposase domain 371 464 IPR018289 -
Lapu6g01532 760 SMART 26again6 657 684 IPR006564 GO:0008270
Lapu6g01532 760 Pfam FAR1 DNA-binding domain 197 271 IPR004330 -
Lapu6g01532 760 Pfam FAR1 DNA-binding domain 43 117 IPR004330 -
Lapu6g01532 760 Pfam SWIM zinc finger 653 679 IPR007527 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g01532 Lapu-Chr6 15073023 15076117 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Lapu6g01532 MULE 4.4e-24 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g01532 - - gmx:100816656 1460.28
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu6g01532 6 15073023 15076117 Lapu6g01532 6 15073023 15076117 ECH