Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g01526 ATGGGTTGTGTCCATGGCAAGTGCTGTACCCGTTACCCTTCACCGTCAGTGGGTGGCTCCAGAGACTTCAGAGAACTTGGCCCTTACAGTGCCCAGAGGAAACACATTCTCACTCAGAGTTCACTGCAATTTGTTCCTGTCCCTTCCCATAACTTCACCTTGGAATACTCTGTGCTCACTCAGAGGGGATACTATCCTGATTCACCTGATAAAGAAAACCAGGATAGTTTCTGCATTAGGACGCAGTTCCAAGGTAATCCGAGTGTCCATTTCTTTGGTGTTTATGATGGGCATGGCGAATTTGGTGCCCAGTGTTCAAACTTTGTTAAGGACAGGTTGGTGGAAAATTTGTCTAGTGACGCTGCATTGTTGGAGGACCCTGTTAAGGCTTACACTTCTGCATTCTTGACCACTAATGAGGACTTGCATAAGAATGAGATAGATGATTCCTTGAGTGGCACCACCGCAATTACGGTGCTTGTTATTGGGGATACCCTTTATGTTGCTAATGTTGGTGATTCGAGAGCAGTGTTGGCTGTTAAGGATGGGAACCGGGTTGTTGCTCAGGACTTGTCTACTGATCAGACACCATTTAGGAGAGATGAGTATGAGAGAGTGAAGCTCTGTGGGGCAAGGGTTTTGAGTGTTGATCAGGTGGAAGGGCATAAGGATCCGGATATTCAGGCTTGGGGTGATGAAGAGAGTCAGGGTGATGATCCTCCTAGGTTGTGGGTTCAGAATGGGATGGTTCCTGGAGCTGCATTTACAAGGAGTGTAGGGGATATGTTGGCTGAGACTATTGGTGTAATTGCTGTTCCTGAGGTTTTAACGGTTCAGCTTACACCTAACCATCTTTTCTTTGTTGTTGCAAGTGATGGTGTATTTGAGTTCCTATCCAGCCAAACTGTTGTTGATATGGCAGCAAGTTATTCAGATCCCCGTGATGCATGTGCTGCCATTGCGGGAGAGTCTTATAAACTATGGTTAGAACATGAGGGTCGAACAGATGATATAACAATTATTATTGTTCAGATCAAAGGCCTATCTAATTCAGGTACATCTGGACTTGGATCAGGTGAGATCAATGTCAGTACTATAACAAGGACCAAGAGCAAGAGGGTAAAGGGAGCATCTGAAATATCTGCCACTACGGGGTTAGATGTTTATCGTTCAGTCAGGAATGGCTTCTCTGATTTACAGTCCTGTCCACAGCACGTGGTCACCACTCGAAGCCCAGCCATAGTGGTCCCCTCTCCAGCATGTCAAACACCTATTGAATTGGTACAGTCACACTAG 1296 0.4591 MGCVHGKCCTRYPSPSVGGSRDFRELGPYSAQRKHILTQSSLQFVPVPSHNFTLEYSVLTQRGYYPDSPDKENQDSFCIRTQFQGNPSVHFFGVYDGHGEFGAQCSNFVKDRLVENLSSDAALLEDPVKAYTSAFLTTNEDLHKNEIDDSLSGTTAITVLVIGDTLYVANVGDSRAVLAVKDGNRVVAQDLSTDQTPFRRDEYERVKLCGARVLSVDQVEGHKDPDIQAWGDEESQGDDPPRLWVQNGMVPGAAFTRSVGDMLAETIGVIAVPEVLTVQLTPNHLFFVVASDGVFEFLSSQTVVDMAASYSDPRDACAAIAGESYKLWLEHEGRTDDITIIIVQIKGLSNSGTSGLGSGEINVSTITRTKSKRVKGASEISATTGLDVYRSVRNGFSDLQSCPQHVVTTRSPAIVVPSPACQTPIELVQSH* 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g01526 431 CDD PP2Cc 71 345 IPR001932 -
Lapu6g01526 431 SUPERFAMILY PP2C-like 44 347 IPR036457 -
Lapu6g01526 431 ProSitePatterns PPM-type phosphatase domain signature. 91 99 IPR000222 GO:0043169
Lapu6g01526 431 Gene3D - 47 347 IPR036457 -
Lapu6g01526 431 PANTHER PROTEIN PHOSPHATASE 73 344 IPR015655 GO:0004722|GO:0006470
Lapu6g01526 431 SMART PP2C_4 51 343 IPR001932 -
Lapu6g01526 431 ProSiteProfiles PPM-type phosphatase domain profile. 55 345 IPR001932 -
Lapu6g01526 431 FunFam Phosphatase 2C and cyclic nucleotide-binding/kinase domain-containing protein 50 347 - -
Lapu6g01526 431 Pfam Protein phosphatase 2C 73 320 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g01526 Lapu-Chr6 15021487 15025645 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu6g01526 1 350 PP2C-type Phosphatase Gene Family AT3G06270 71.955 0.0 512
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g01526 - - gsj:114373061 821.617
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu6g01526 6 15021487 15025645 Lapu6g01526 6 15021487 15025645 ECH
Lapu3g00200 3 2174207 2178189 Lapu6g01526 6 15021487 15025645 PCT