Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g01522 ATGAACCAGTACCACATCTATGAAGCCATCGGTCGCGGCAGATACTCCACCGTTTATAAAGGCAGGAAGAAGAAGACTATCGAGTATTTCGCCATCAAGAGCGTCGATAAATCGCAGAAAACTAAGGTCCTTGAAGAGGTCAGGATTCTTCACACGTTGGATCATATAAATGTGCTGAAGTTTTATGATTGGTACGAAACTTCTGCTCACCTATGGTTGGTTTTGGAGTACTGCGTTGGAGGGGATCTGCTTTCCATATTACGACAGGATAGTAAACTTCCCGAAGACTCAGTTCACGATCTTGCGTATGATCTAGTGAAAGCTTTGCAATTTTTACATTCACATGGAATAATTTATTGTGACCTAAAACCATCAAATATTCTACTAGATGAAAATGGATGCGCAAAGCTATGTGATTTTGGATTGGCTAGGAAGTTGAAAGATATATCAAAAGCTCCATCTTCCTCGTTACCACGGGCAAAACGAGGAACACCCTCTTACATGGCTCCGGAGCTTTTTGAGGATGGTGGAGTCCATTCATATGCTTCTGATTTCTGGGCACTAGGCTGTGTACTATATGAATGTTATGCTGGGAGGCCACCCTTTGTGGGAAGAGAATTCACTCAGCTCGTAAAATCCATCATTTCAGATCCGACTCCACCTCTCCCTGGTAGTCCAAGTCGACCTTTTGTTAATTTAATTAATTCCCTGTTGGTAAAGGATCCAGCTGAAAGAATACAGTGGCCTGAGCTTTGTGGACATGCCGTTTGGAGAACCAAACTTCCTCTGGTGCCTCTGCCTGCTCAACCTGCATTTGATGATATGATAGAGCTACATACTAGACCTTGCTTATCAGAACGAAATGGAGATAAATCTTTGCTTAACAGGACACCTCCCAAATATCGTGAAAAAGATGTCAAAGGGGTGTTGAAGAAGGATGAGAACTCTGTTTTAGGATCTAGAGGCATTGAGACACCAACCAGGGCAACACGAAATGGCCCCAGAACTCAGACAAAAGGTTCTGGCAGAACACTTGAGGTAAAACAGAAAGATCATTCCAATATTAGCAAGGGTGTGAATCTATTGAGATTATCAAGAATAGCAAAAACAAATTTACAGAGGGAAAATGAGAAAGAAAACTATCGACGCCCATTGCCTAATAATTCTGAGAATGATTCTGAAGTTAAAATTGAGAACACTGACATGGAACTTGATTTTAACGAGAATACTGAAGATGATACACATGAAGAAACTGATGGCACCGAACAAACAGCTTCTGTGCCCGATGAGAAAATGGACAATCATTTTCTGAATCAGGGAAAAACAGAGGAGATTGAAAATAATACACACCAGTTGGATACCCCATCTGCTGTTAACCCTCCAGTCTCAGATGATCCAAGGTCATTTGATCATGAATCAACTCCTGACCGTCCTGACATATCTGGTATTTCTCCCAGTGTGAGCCCTCAGGTGAAGAAGCATAGAGCTAAAGAAGACTCAGGATCTGGTCTTGAGTCTGATTCTTCAAGATTGTCTAACAACCTTTCCCAGGTTCTTTGGCATCCGTCTGATCTGTCAGTCAGACCTGTAATGCCTAGCAGAAAAGTTGATAAAGTCTCGGAAGTCATTCCTTCACTCCCTTTTGAGGCATTGCAAGCGTCTGATTTTGTTAAGATGCCTAAAGAGCAATTGGAGGCAGTCCACAACCGAATATTAGCCATTTTGAATGGAAATACCAGCATTGGAGAGAAACAGAATGTGATTAGGTACCTTGAGATGTTGAGCATTAATGCTGATGCAGCTAATATCTTGACCAATGGGCCAATTATGCTCATGCTTGTAAAATTGCTGCGTCAATCCAAGGCATCAGCTTTGCGTGTTCAACTTGCTTCACTGATTGGTCTGTTGATTAGGCACTCCACTTTTGTTGATGACAGTCTGGCTAATTCTGGAATTTTAGGTGCACTGACCGATGGCCTTAGAGACAGGCAGGAAAAAGTAAGGAGGTTTTCCATGGCTGCTTTGGGTGAGTTGCTATTTTATATATCCACTCAAAGTGCAGACTGCAGGGATAACAATCAACTTGAATCTCCATCAAAGGACAATAGGACTGCATATGGCTGGCAGGTTCCAAATTCGTTAATATCACTGGTGTCATCAATGTTGAGGAAGGGCGAGGACGATATAACTCAATTGTATGCATTGAGAACAATTGAGAATATTTGCAGTCAAGGAGGGTTTTGGGTGGGGCGATTGAGCAGTCAAGATGTTTTTAGTAATCTCTGTTACATCTATAGGGCGGCAGGGAAACAAGAGAGTATGAGGCTCACTGCAGGATCATGCTTGGTGCGCCTTGTTCGTTTTAATCCTCCTAGCATTCAGTCCGTTATTGAGAAACTCTCATTCAAGGACCTAGCTTCTGCTCTTGTAAAGGGTAGTCCACGAGAGCAGCAAATCAGCTTAAATCTTCTTAACATAACAATGCTTGGAAGTCACTTGTTCACAAATATTGGAAGATACCTGGTACAACTTGCCGATGATAAAAATCTGATCCCAAGTCTTTTGGCTCTTGTTGAGCAAGGTAGTGAAGTTTTAAGAGGAAAGGCACTAGTTCTTGTGGCTCTCCTCTGTAAGCACGGCAGGAGGTGGCTTCCACACTTCTTTTGTAGTCAAAAGTTGCTTTCAGTGGTGGACAGGCTGGGAAAAGAAAAAGATGCCTATGTGAGGCAGTGTTTGGATGCATTTGTGCATATTGTGGCATCCAGTATTCCAGGTTTATTGGATATAATAACTGGGGATGTCCAGCTAATGATGGGAGGAAGGCGCCATGGACACATCTCTGCCCTTACCAGCAGATCTCCAAAAACCAATATTCATTTGTTTCCTGTTGTTCTTCATCTTCTTGGAACTTCAACTTTTAAGCACAAAGTCGTGACACCACAAGTCGTACTTCAGTTGGCGAATCTAATTAAACTCGTCGAGACACCATTTCAGGGAAGAGATGACTTCCAAATAACACTTCTTCGAATTTTCGAGTCTCTCACGGAGGAATCTCCTATGATTCTTGGCAATGCTGACATTTTCGTACGTGAAATCCTCCCTAGTTTGACAGTTCTCTACAAGGGTAACAAGGATGGTGATGCCAGGTTTTTGTGCCTTAAAATTCTTTTTGATGTGATGATCATTCTTTTGAGTGAACCAATTGAAGAAGAGCAGCGATTGAAGGATCTGAAATTCATATCAAATACCCGTTTTCTTCCTCTCTACCCAACCTTGATTGAAGATGAAGATCCTATTCCTATTTATGCCCAGAAGCTTCTTGTTATGCTACTGGAGTTCAGTTTTATTACAATTCCAGACATTCTACATATGAAGGCAATTTCACAATGCTTTGAGTTCTTGCTGGGTGATCTCTCAAATGCAAATGTGAATAATGTTAAGCTGTGTCTTGCTCTAGCTTCTGCTCCTGAGATGGAGTCCAAATTACTCTCGCATTTAAAGGTGGTTAGGAGGATTGGCAACTTTCTTGAGTTTGTACATGCAAAGGGCATGGAAGATTTGCTGGAACCAACTCTTGGGCTGTGTAGGGCTTTTATAGCACGTTCAGTTGGCTGTACAAAAGGCTTGAGCAGCACAACAGAACCAGCTCTCTTAGGTGATTGTCCTCCCGAGTTTAGTGGTGGTGCTATTGATCCCCAGCAATGCATAAAAGATATCGCAGACTTTGGAAGCAATTTTGGTGTTTTGCTAGAGTTGAGTGCCTCTGCAGAAACCAGTATTGCCGATGTAGCCTCTGAATGTGTTGTTTTACTGTTCAAGGCAGCTCCTAGAGAAGCGACCACTGGTATACTAACCAATCTTCCCAAGGTCACTGTGATCCTAGAGAGCTGGAATAGAGGCATCCCTCACTTAATGGTGCAGCGTATGCTTCATTCTTTAGGTTATGCTTGCAAGCAATACTTGCTGCACGCAATGATATTGTCAATATCTAAACCAGAGATTTCAAGAATTGAAGTTATAGTTTCTGAACTCAAAAGTTCAGGTGTACCAGTCTTAGCCAAAACTGCTGGGCTAGCTGCCTTGGAATTGCAGCGGTTGCCTCGCTGCATTTGA 4113 0.4238 MNQYHIYEAIGRGRYSTVYKGRKKKTIEYFAIKSVDKSQKTKVLEEVRILHTLDHINVLKFYDWYETSAHLWLVLEYCVGGDLLSILRQDSKLPEDSVHDLAYDLVKALQFLHSHGIIYCDLKPSNILLDENGCAKLCDFGLARKLKDISKAPSSSLPRAKRGTPSYMAPELFEDGGVHSYASDFWALGCVLYECYAGRPPFVGREFTQLVKSIISDPTPPLPGSPSRPFVNLINSLLVKDPAERIQWPELCGHAVWRTKLPLVPLPAQPAFDDMIELHTRPCLSERNGDKSLLNRTPPKYREKDVKGVLKKDENSVLGSRGIETPTRATRNGPRTQTKGSGRTLEVKQKDHSNISKGVNLLRLSRIAKTNLQRENEKENYRRPLPNNSENDSEVKIENTDMELDFNENTEDDTHEETDGTEQTASVPDEKMDNHFLNQGKTEEIENNTHQLDTPSAVNPPVSDDPRSFDHESTPDRPDISGISPSVSPQVKKHRAKEDSGSGLESDSSRLSNNLSQVLWHPSDLSVRPVMPSRKVDKVSEVIPSLPFEALQASDFVKMPKEQLEAVHNRILAILNGNTSIGEKQNVIRYLEMLSINADAANILTNGPIMLMLVKLLRQSKASALRVQLASLIGLLIRHSTFVDDSLANSGILGALTDGLRDRQEKVRRFSMAALGELLFYISTQSADCRDNNQLESPSKDNRTAYGWQVPNSLISLVSSMLRKGEDDITQLYALRTIENICSQGGFWVGRLSSQDVFSNLCYIYRAAGKQESMRLTAGSCLVRLVRFNPPSIQSVIEKLSFKDLASALVKGSPREQQISLNLLNITMLGSHLFTNIGRYLVQLADDKNLIPSLLALVEQGSEVLRGKALVLVALLCKHGRRWLPHFFCSQKLLSVVDRLGKEKDAYVRQCLDAFVHIVASSIPGLLDIITGDVQLMMGGRRHGHISALTSRSPKTNIHLFPVVLHLLGTSTFKHKVVTPQVVLQLANLIKLVETPFQGRDDFQITLLRIFESLTEESPMILGNADIFVREILPSLTVLYKGNKDGDARFLCLKILFDVMIILLSEPIEEEQRLKDLKFISNTRFLPLYPTLIEDEDPIPIYAQKLLVMLLEFSFITIPDILHMKAISQCFEFLLGDLSNANVNNVKLCLALASAPEMESKLLSHLKVVRRIGNFLEFVHAKGMEDLLEPTLGLCRAFIARSVGCTKGLSSTTEPALLGDCPPEFSGGAIDPQQCIKDIADFGSNFGVLLELSASAETSIADVASECVVLLFKAAPREATTGILTNLPKVTVILESWNRGIPHLMVQRMLHSLGYACKQYLLHAMILSISKPEISRIEVIVSELKSSGVPVLAKTAGLAALELQRLPRCI* 1371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g01522 1370 SUPERFAMILY ARM repeat 567 918 IPR016024 -
Lapu6g01522 1370 SMART serkin_6 4 257 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu6g01522 1370 MobiDBLite consensus disorder prediction 317 357 - -
Lapu6g01522 1370 ProSitePatterns Protein kinases ATP-binding region signature. 10 33 IPR017441 GO:0005524
Lapu6g01522 1370 Gene3D Transferase(Phosphotransferase) domain 1 1 287 - -
Lapu6g01522 1370 MobiDBLite consensus disorder prediction 320 343 - -
Lapu6g01522 1370 Gene3D - 556 917 IPR011989 -
Lapu6g01522 1370 CDD STKc_ULK4 3 257 - -
Lapu6g01522 1370 MobiDBLite consensus disorder prediction 419 433 - -
Lapu6g01522 1370 MobiDBLite consensus disorder prediction 449 510 - -
Lapu6g01522 1370 MobiDBLite consensus disorder prediction 370 385 - -
Lapu6g01522 1370 FunFam Aurora kinase A 1 81 - -
Lapu6g01522 1370 PANTHER SERINE/THREONINE-KINASE ULK4-LIKE PROTEIN-RELATED 1 1367 IPR044591 GO:0000911|GO:0000914|GO:0008017
Lapu6g01522 1370 SUPERFAMILY Protein kinase-like (PK-like) 1 258 IPR011009 -
Lapu6g01522 1370 ProSitePatterns Serine/Threonine protein kinases active-site signature. 117 129 IPR008271 GO:0004672|GO:0006468
Lapu6g01522 1370 ProSiteProfiles Protein kinase domain profile. 4 257 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu6g01522 1370 MobiDBLite consensus disorder prediction 404 418 - -
Lapu6g01522 1370 Pfam Protein kinase domain 4 255 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu6g01522 1370 MobiDBLite consensus disorder prediction 370 433 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g01522 Lapu-Chr6 14987393 14994210 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu6g01522 1 246 AGC Kinase Gene Family AT1G45160 34.058 4.42e-36 147
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK ULK_ULK4 Lapu6g01522 Pkinase 6.3e-65 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g01522 K17545 - gmx:100777288 2492.61