Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g01521 ATGGAGTGCAATAAAGAAGAGGCCGTGAGGGCCAAGGAAATTGCTGAAAAGAAAATGCAAAACAAAGATTTCAATGGGGCTCGAAAGTTTGCTCTTAAGGCTCAGCAGCTATATCCTGATTTGGAGAATATTAATCAAATGCTCATTGTCTGTGATGTGCATTGCTATGCTGAGCAGAACTTGTTTGGCAATGAAATGGACTGGTATAAAATTCTTCAAATTGAGCTGACGGCTAATGATACAACAATTAAGAAGCAATACAGGAAGTTTGCCCTCCAACTTCATCCTGACAAAAACAAGTTTGCTGGTGCAGAAGCTGCATTTAAGCTGATTGGGGAAGCTCAAAGAGTTCTTTTGGATAGAGAAAAACGAACTAGGCTTGACATGAATTTGCGCAGGGTTCCAATGAACAGAACTACCATGCCTTCTCATCATCAGCAGAACGTTCAGATGAATTTTAATCCTGTGATGCAAACCACTGTCAGGCCAAATTTTACAAACTTAAATCCTCATCAGCAACAACAGTCTAGGCAGACATCTCATCAGGGGCCTAATGGTGGCCGCCCTACTTTTTGGACGGCATGCTCATTTTGTTGTGTTAGATACGAGTATTATAGGGAAGTTTTAAACAGATCTCTTCGCTGTCAACATTGCAATAGGCCATTCATTGCATATGATGTTAATATGCAAGGTACAACAGCAACTAATTCAAGTCAGCAAGCTTTTGCTGCACAGAACTATAGTCAGAATCATGGTGCTTTCAATATTGGTGTTGGATCACAAGGTAATTTGCATACTCGCAGATCAAATACTGAATCACATCAGAATAAAGGTCATACTGTGGATGCCCCTGTAAAGCCAAATGGAAAGAGAAGGAGAAAGCGGGCAGCTGAATTCAGTGAAAGTTCTGAATCTGTGGACAGCACTGACTCTGAATCTGAAGAGGATATTCGTTATGACAATGATGTTGTTTCTGGTTTTTCTAACCGTAGAGAAGAGAATCCACGTAGATCTACACGGCAAAAGCATCAGGTTTCCTATAAGGAGAATGTGAGTGATGATGATGGGAGTGAATCTCCATCTGCTGCTGGTGAAGAGGAGCACGGGGAGGCAGCTAAAATTAATGAACAGAACGGGTTGGCTGCTGATAAGAAAGATCAACGGCAGGTAAAGCAGAAGCAGAACATTTGTTCTGAAGAGAACATTCAAAATATAAAAGGGGAGCTTAAGGAGGTGAGGGAAAAAGAGGCAGTGGGCAGCTCAAAGACAGACAAAACTTCAGAGCATTCACCCTCGAATTCAACAAATCAACCAGATAATTTTATTTATCCAGATGCAGAATTCGGTGACTTTGACAAAGACAAGAAAGAGGGGTCCTTTGCTGCTGGGCAGATTTGGTCTATTTATGATACCATAGATGGTATGCCTCGATTCTATGCTTTAATCAGAAAAGTTCTGTCTCCTGGATTCAAGTTGCGGATAACATGGTTTGAACCAGATGCAGAAGAGAAAGACGAAATCCACTGGGTGAATGAGAAATTGCCAGTTGCTTGTGGGAAACATAGACTTGGTAATACAGAAAACACTGAAGATCGACTGATGTTCTCTCATCCTATTGTCTGTGAAAAGATTGGCCGCACCACGTATAAAGTATATCCTAGAAAGGGGGAAACTTGGGCTCTTTTTAAAAATTGGGATATCAAATGGCGTATGGATGCGAATAGGCAGTATGATTTTGAATTTGTTGAAATCTTGTCAGATTACGTTGAAGGTGTGGGAGTACTTGTTGCGTATTTGGCTAAGTTGAAAGGTTTTGTGTCTCTCTTCTCTCAAATGGATGGAGGCAAGCAATCAATTCAAATTCCACCAGCAGAGCTATTCAGATTCTCGCACAGGGTTCCTTCTTTTAAAATGACTGGTCAGGAAAGAGTTGGGGTTCCTGTAGGGTCTTTTGAACTTGACCCTGTATCCTTGCCAATGAATATTGAGGAAATTACTGTTCCTGGAGATTTGGATTGTCCATCTGGTGGGAATGATACAAGGTCTTCAGATACGGTGAAATTTGACAGGGAGGTAGATGCATCTACTGCAAAGCTTAATTTGGAAAGAGACGATTCATCAAAGAAGAACAAGGATCCCACTTATCATACTGGTAGTGATTCTTCAGCCTCAGCCGCAGATGCTTTTGAAATTCCAGATCCTGAGTTCTACAATTTTGATGCTGGGAGGTCCCTTGAAAAGTTTCAGGTTGGTCAGATTTGGGCATTTTATGGGGATGAGGACGGACTGCCAAAATACTATGGTCAAATTACGAGGATTACGACTAGTCCAGAACTTGAGTTGCAAGTTATCTATCTTACTAACTGCTGGATACCGGAGAACATTGTCAGATGGGAAGATAAAGACATGCTTATTTCCATTGGAAGATTTAAAATCCAAACAGATGCCCCGCCCTGCTCTTATACTAACACCTATTCTATTTCACATCAAGTGCAGACTATTACCGATGGTAAGAAGAAGGAATATGAAATTTTTCCTAGGAAAGGCGAAATTTGGGCCTTGTACAAGAATTGGACGACTAAAATAAAACGTTCTAATCTGGAAAAGTTGGAGTATGACATAGTGGAAGTTGTTGGAGAAAATGATTTGTGGATGGATGTTCTACCTTTGGAGTTGGTAAGTGGTTATAATTCAGTTTTTAAGGGCAAATCAAATGCAGGATCAGCTAGGACCATGAAAATATTTTGTAAGGAGTTGCTCAGGTTCTCCCACCAAATCCCTGCCTTCAAACTATCAGAAGAACATGGTGTCGATCTGAGGGGCTTTTGGGAGCTTGATCCTGGAGCACTGCCCCTTCATTATTTTAACAGCAAATAA 2877 0.4101 MECNKEEAVRAKEIAEKKMQNKDFNGARKFALKAQQLYPDLENINQMLIVCDVHCYAEQNLFGNEMDWYKILQIELTANDTTIKKQYRKFALQLHPDKNKFAGAEAAFKLIGEAQRVLLDREKRTRLDMNLRRVPMNRTTMPSHHQQNVQMNFNPVMQTTVRPNFTNLNPHQQQQSRQTSHQGPNGGRPTFWTACSFCCVRYEYYREVLNRSLRCQHCNRPFIAYDVNMQGTTATNSSQQAFAAQNYSQNHGAFNIGVGSQGNLHTRRSNTESHQNKGHTVDAPVKPNGKRRRKRAAEFSESSESVDSTDSESEEDIRYDNDVVSGFSNRREENPRRSTRQKHQVSYKENVSDDDGSESPSAAGEEEHGEAAKINEQNGLAADKKDQRQVKQKQNICSEENIQNIKGELKEVREKEAVGSSKTDKTSEHSPSNSTNQPDNFIYPDAEFGDFDKDKKEGSFAAGQIWSIYDTIDGMPRFYALIRKVLSPGFKLRITWFEPDAEEKDEIHWVNEKLPVACGKHRLGNTENTEDRLMFSHPIVCEKIGRTTYKVYPRKGETWALFKNWDIKWRMDANRQYDFEFVEILSDYVEGVGVLVAYLAKLKGFVSLFSQMDGGKQSIQIPPAELFRFSHRVPSFKMTGQERVGVPVGSFELDPVSLPMNIEEITVPGDLDCPSGGNDTRSSDTVKFDREVDASTAKLNLERDDSSKKNKDPTYHTGSDSSASAADAFEIPDPEFYNFDAGRSLEKFQVGQIWAFYGDEDGLPKYYGQITRITTSPELELQVIYLTNCWIPENIVRWEDKDMLISIGRFKIQTDAPPCSYTNTYSISHQVQTITDGKKKEYEIFPRKGEIWALYKNWTTKIKRSNLEKLEYDIVEVVGENDLWMDVLPLELVSGYNSVFKGKSNAGSARTMKIFCKELLRFSHQIPAFKLSEEHGVDLRGFWELDPGALPLHYFNSK* 959
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g01521 958 MobiDBLite consensus disorder prediction 318 393 - -
Lapu6g01521 958 Pfam DnaJ domain 67 128 IPR001623 -
Lapu6g01521 958 MobiDBLite consensus disorder prediction 667 724 - -
Lapu6g01521 958 MobiDBLite consensus disorder prediction 407 423 - -
Lapu6g01521 958 ProSiteProfiles dnaJ domain profile. 67 131 IPR001623 -
Lapu6g01521 958 PANTHER DNAJ HEAT SHOCK AMINO-TERMINAL DOMAIN PROTEIN-RELATED 1 693 - -
Lapu6g01521 958 Coils Coil 395 415 - -
Lapu6g01521 958 MobiDBLite consensus disorder prediction 407 448 - -
Lapu6g01521 958 MobiDBLite consensus disorder prediction 683 715 - -
Lapu6g01521 958 MobiDBLite consensus disorder prediction 424 441 - -
Lapu6g01521 958 Pfam Domain of unknown function (DUF3444) 439 642 IPR024593 -
Lapu6g01521 958 Pfam Domain of unknown function (DUF3444) 728 934 IPR024593 -
Lapu6g01521 958 MobiDBLite consensus disorder prediction 253 269 - -
Lapu6g01521 958 MobiDBLite consensus disorder prediction 162 186 - -
Lapu6g01521 958 MobiDBLite consensus disorder prediction 253 395 - -
Lapu6g01521 958 SMART dnaj_3 66 123 IPR001623 -
Lapu6g01521 958 Gene3D DnaJ domain 64 181 IPR036869 -
Lapu6g01521 958 CDD DnaJ 67 120 IPR001623 -
Lapu6g01521 958 PRINTS DnaJ domain signature 69 87 IPR001623 -
Lapu6g01521 958 PRINTS DnaJ domain signature 103 123 IPR001623 -
Lapu6g01521 958 PRINTS DnaJ domain signature 87 102 IPR001623 -
Lapu6g01521 958 SUPERFAMILY Chaperone J-domain 64 148 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g01521 Lapu-Chr6 14976482 14981711 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu6g01521 4 227 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 36.681 5.65e-32 126
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g01521 - - gmx:100779228 1536.16