Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g01509 ATGAACGAGAACCAACAGCTTCCCCGAGAAGATTATGTTGGCAGCAATGGCGTCCACAAGTTTGAAAGAAAACAAATAGTTGAAAGGGAGAAATCTCTTTTTAGAGGCAGACGTCCACGACCTGGGTTTTCTGATTCGTTCTCCAGTATTGAATTGGAAACTATAGACATTGAAGAGGGAGGCCTACATGAGCACTCTCCTAGGAGTCAAGGGTCTGAAACCCCAAGGGCCAGCACTTCTGATTCGGAGAGTCAGGGGTCTTTAGTAGGCAATTCACCTAATTCTAATAACCAATGGCGTGGTTTCTTTAAGTTACTGAAGAAAGGATCTCAAATGCCTTTTCAAACTTTTCATCCACTTAAAAATGTTCCTAAACTGACAAGAAGAAAAAGCAAGAGAATCAGGGAGGACCTGATTCCATCTTTGAATTCTCCAGCTCTTCAGTCATCTTTTGACACTGAGTTTGGCTGCTTCAAATCTTCCTGGAAAAACTTCACTCTCGCAGAGATCTTGACTGCAACAGACGACTTTAGCCATGATAATTTGATTGGGGAGGGAGGCTATGCTGAGGTTTATTTAGGCAAATTGGAAGATGGAAACTTTGTTGCCATTAAACGGTTGACAAGAGGGAACCCAGAAGAAATGACTGCAGATTTCTTGTCCGAGCTTGGCATTATAGTACATGTGGATCACCCCAACATAGCTAGATTGATTGGATACGGTGTTGAAGGAGGAATGTTTCTTGTTCTTCAATTGTCTCCACATGGTAGCTTGTCATCTATACTTTACGGACCTAGAGAGAAACTGAATTGGAGCCTCAGATATAAGATTATTTTGGGGACTGCTGAGGGCCTCCGCTATCTGCATGAGGGGTGTCAGAGAAGGATCATTCACAAAGACATTAAGGCTTCTAATATTTTACTCTCAGAGGATTTTGAGCCCCAGATATCTGATTTTGGGCTTGCAAAGTGGTTACCTGACCAATGGACGCACCATACTGTCTCCAAAGTGGAAGGAACATTCGGGTTTGCAAAACCTTTGCTATCTGCAAATAAGATCAAAGACCTTGTGGATCCAGTTTTGGTTGATGCTTACGATGAAGAGCAGATGAGACTCGTAACCTTAACAGCTTCTCTATGTGTAGACCAGTCTTCGATTCAGCGACCAGATATGAGTTTTAGAGATACTAAGAGGGGAAGAACATATCGTAAGAATCATGAAAGAAAGGACGAAGGTAAAACTTCAGAGGACATACTCTGA 1260 0.4238 MNENQQLPREDYVGSNGVHKFERKQIVEREKSLFRGRRPRPGFSDSFSSIELETIDIEEGGLHEHSPRSQGSETPRASTSDSESQGSLVGNSPNSNNQWRGFFKLLKKGSQMPFQTFHPLKNVPKLTRRKSKRIREDLIPSLNSPALQSSFDTEFGCFKSSWKNFTLAEILTATDDFSHDNLIGEGGYAEVYLGKLEDGNFVAIKRLTRGNPEEMTADFLSELGIIVHVDHPNIARLIGYGVEGGMFLVLQLSPHGSLSSILYGPREKLNWSLRYKIILGTAEGLRYLHEGCQRRIIHKDIKASNILLSEDFEPQISDFGLAKWLPDQWTHHTVSKVEGTFGFAKPLLSANKIKDLVDPVLVDAYDEEQMRLVTLTASLCVDQSSIQRPDMSFRDTKRGRTYRKNHERKDEGKTSEDIL* 420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g01509 419 MobiDBLite consensus disorder prediction 1 20 - -
Lapu6g01509 419 ProSitePatterns Serine/Threonine protein kinases active-site signature. 296 308 IPR008271 GO:0004672|GO:0006468
Lapu6g01509 419 Gene3D Phosphorylase Kinase; domain 1 141 251 - -
Lapu6g01509 419 MobiDBLite consensus disorder prediction 56 70 - -
Lapu6g01509 419 FunFam Receptor-like cytosolic serine/threonine-protein kinase RBK2 147 251 - -
Lapu6g01509 419 MobiDBLite consensus disorder prediction 71 96 - -
Lapu6g01509 419 Pfam Protein kinase domain 179 352 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu6g01509 419 MobiDBLite consensus disorder prediction 391 419 - -
Lapu6g01509 419 FunFam Os07g0541700 protein 253 340 - -
Lapu6g01509 419 SMART serkin_6 177 392 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu6g01509 419 SUPERFAMILY Protein kinase-like (PK-like) 162 346 IPR011009 -
Lapu6g01509 419 MobiDBLite consensus disorder prediction 390 419 - -
Lapu6g01509 419 Gene3D Transferase(Phosphotransferase) domain 1 254 350 - -
Lapu6g01509 419 ProSiteProfiles Protein kinase domain profile. 177 419 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu6g01509 419 PANTHER OS08G0249100 PROTEIN 344 392 IPR046958 -
Lapu6g01509 419 ProSitePatterns Protein kinases ATP-binding region signature. 183 205 IPR017441 GO:0005524
Lapu6g01509 419 MobiDBLite consensus disorder prediction 28 96 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g01509 Lapu-Chr6 14858720 14861964 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu6g01509 148 392 Receptor kinase-like Gene Family AT1G53420 33.670 1.92e-46 169
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Lapu6g01509 Pkinase 8.3e-28 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g01509 - - gmx:102670300 662.914