Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g01476 ATGGTTACGTTCAGGGTGCGTTTTCACCAGTACCAGGTCGTTGGGAGGGCTCTCCCAACGGAAGCAGATCAGCACCCTAAGATTTACCGCATGAAGCTTTGGGCCACGAACGAGGTTCGCGCAAAATCCAAGTTCTGGTATTTTTTGAGGAAGCTGAAGAAGGTGAAGAAGAGCAATGGTCAAATGCTCGCTATCAACGAGAGTAGGACCGGTTATCACAACATGTACAAGGAGTACCGTGACACCACTCTGAATGGTGCAGTTGAGCATATGTACAATGAGATGGCTTCGCGTCACAGGGTCAGGTGCCCCTGCATCCAAATCATTAAGACTGCTACCATTCCAGCCAAGCTTTGCAAGAGGGAGAGCACCAAACAATTCCACAACTCCAAAATCAAGTTCCCATTGGTCTTCAAGAAAATTAGGCCACCGTCTAGGAAGCTGAAGACCACATACAAGGCCAAGAAGCCCAACTTGTTTATGTAA 486 0.4794 MVTFRVRFHQYQVVGRALPTEADQHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQMLAINESRTGYHNMYKEYRDTTLNGAVEHMYNEMASRHRVRCPCIQIIKTATIPAKLCKRESTKQFHNSKIKFPLVFKKIRPPSRKLKTTYKAKKPNLFM* 162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g01476 161 FunFam 60S ribosomal protein L18a 3 71 - -
Lapu6g01476 161 SUPERFAMILY RplX-like 66 129 - -
Lapu6g01476 161 PANTHER 60S RIBOSOMAL PROTEIN L18A 6 160 IPR028877 -
Lapu6g01476 161 Gene3D - 6 65 - -
Lapu6g01476 161 Pfam Ribosomal proteins 50S-L18Ae/60S-L20/60S-L18A 9 111 IPR023573 GO:0003735|GO:0005840|GO:0006412
Lapu6g01476 161 PIRSF Ribosomal_L18a 5 68 IPR021138 GO:0003735|GO:0005840|GO:0006412
Lapu6g01476 161 PIRSF Ribosomal_L18a 66 161 IPR021138 GO:0003735|GO:0005840|GO:0006412
Lapu6g01476 161 Hamap 50S ribosomal protein L18Ae [rpl18a]. 8 71 IPR028877 -
Lapu6g01476 161 Gene3D - 66 130 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g01476 Lapu-Chr6 14575070 14577689 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu6g01476 7 161 Cytoplasmic Ribosomal Protein Gene Family AT2G34480 83.333 1.62e-103 294
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g01476 K02882 - jre:108990266 304.293
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu6g01476 6 14575070 14577689 Lapu6g01476 6 14575070 14577689 ECH