Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g01468 ATGTCGCTTTCCTGTGCCAAAAACTTCTTCCAGAGGTTCTGGCTAGATGAATTCCAAATGGGAAATATTCCCCATGGAAGCTTTTTGGCCAATGATGATCTCCTGCCATCTCTTGGAGCCAGAATTAACCAGGAAATTAGACTTAGAAGATACGTAATCTCCCCTTTCAATCCTCGCTATAGGGCTTGGGAGTTGGTACTGGTTTTTCTAGTCATATACTCAGCTTGGATTTGCCCATTTGAGTTTGCCTTTCTGCCTTACAAGGAAGATGCTCTATTCGTCATAGACAACATTGTCAATGGCTTCTTTGCAATTGACATAGTGTTGACATTCTTTGTTGCATACCTTGATCACCATTCTTATCTTCTTGTTGATGATCCAAAGAGGATTGCAATCAGGTACCTATCTTCCTGGTTTGCTTTTGATGTCTGCTCGACAATACCGTTTCAATCCTTCAGCTTCCTCTTCACCAATTCTAGCAGTGAGCTTGGCTTCAAAGTTTTTAATATGTTTCGGTTATGGCGTTTGAGACGAGTCAGTTCTCTGTTTGCAAGACTTGAAAAGGACATTCGCTTCAATTATTTCTGGACTAGGTGCACAAAGCTCATTGCTGTGACCTTGTTTGCTGTGCACTGTGCGGGATGCTTTAACTATCTCATTGCAGATAGGTACCCAGATTCCAAAAGAACCTGGATTGGTGCAGTGTACCCAAATTTCAAAGAAGAAAGTCTTTGGGACAGATATGTCACTGCAATATACTGGTCCATTGTCACTCTTACTACCACTGGCTATGGGGATTTACATGCTGAGAACACAAGAGAGATGCTGTTTGATATTGCTTACATGCTGTTCAACTTGGGTTTAACTTCGTATATCATTGGAAACATGACTAACCTTGTAGTCCACTGGACCAGCCGTACCAGAAATTTTAGAGACACAGTCAAAGCAGCTTCCGAATTTGCATCAAGAAATCATTTGCCCCATCGTATACAAGATCAAATGTTGTCACATATATGTTTGAGGTTTAAAACAGAAGGATTGAAGCAGCAAGAAACATTGAATGATCTTCCAAAGGCAATTCGTTCAAGCATTGCACACCATCTGTTTTTTCCTGTCGTGCAAAAGGTCTACCTTTTCCAAGGAGTCTCACATGATTTCCTTTTCCAACTGATTTCAGATATGGAGGCTGAATATTTCCCACCCAAGGAAGATGTAATACTACAAAACGAGTCTTCCACAGAACTTTATGTGCTGGTTTCAGGGGCAGTGGATCTGCTTCGCTACATCGATGGGCATGAACAAGTTCATGGGAAGGCAGTTGCAGTTGATGCGTTTGGAGAGATTGGAGTTTTATATCAGATACCCCAGCCTTTTACAGTTCGGACCACAGAACTTTCTCAGATTTTAAGACTCAACAAAACCTCCTTAATGAATGTTTTACAAGCAAATCCAGGAGACGCACAAATTATAATGGATAACCTTTTAATGAGGTTGAAGGGGCGTGAAGATTTTGGCTTTGAATGTCCATGCACAGATTCTAGGCGGTTTCCAAATGAACTGGTTCAAGGGGATTACACGAGAGGAAGCTCTTCTCACGAGTGTACAAATAATTCACATGAGCATTCATTAATGCATGAAGGCGAGTGCATAGATATTAGAAACTCTGAGACCAGTTTGCGGAAGGTGACTAATGATCATTTAGTCACTAAACATAGCATGATCCCTGAGCATGATACAAGAGAAGCTCGTGCCCCTGCACGCAAAGGGAATCTAGACATTGTTGAAATTTTGCTGGAAAGAGACTCAAATCCTAACCCAAATTCCAGAGGGTGGACACAAAATGCTCTAGCAAAACAGCCGAAATACAAGAGCATTTGTGACCAAAAAAGGATTGATGAAAACGAGAAGTTAGATGAATTTAGAATAGAGATAGCGGAGCCAGAAATCCTCCTTGACAGGGATAGCTCAACGAGAAACAGAAGACATGATGGTATTAGATCTATCAAGTTCCCAAAAGCAAAAATAAGCACAAACGCCAGTTCAAGAAATTCTAGTTGTCCAAGTGATATAGAATCGGCAAGGCTCCCCAAGAAGAGAGTAACAATCCAGTTGCTACATGGATGCAGGAGTACCTCACAGGGAAGGCATGGAAAATTAATAATCCTGCCCGATTCATTAGAAGAGCTGCTAAAAATTGCCGGTGAAAAATTTGGCGGCTTCAACCCTACCAAAGTAGTAAATACAGAGAATGCAGAGATAGATGACATAAATGTCATCCGAGATGGAGATTGTCTCTTTCTTCTGGGCAGCGATGACGAAAATTTGTGTTCATGA 2334 0.413 MSLSCAKNFFQRFWLDEFQMGNIPHGSFLANDDLLPSLGARINQEIRLRRYVISPFNPRYRAWELVLVFLVIYSAWICPFEFAFLPYKEDALFVIDNIVNGFFAIDIVLTFFVAYLDHHSYLLVDDPKRIAIRYLSSWFAFDVCSTIPFQSFSFLFTNSSSELGFKVFNMFRLWRLRRVSSLFARLEKDIRFNYFWTRCTKLIAVTLFAVHCAGCFNYLIADRYPDSKRTWIGAVYPNFKEESLWDRYVTAIYWSIVTLTTTGYGDLHAENTREMLFDIAYMLFNLGLTSYIIGNMTNLVVHWTSRTRNFRDTVKAASEFASRNHLPHRIQDQMLSHICLRFKTEGLKQQETLNDLPKAIRSSIAHHLFFPVVQKVYLFQGVSHDFLFQLISDMEAEYFPPKEDVILQNESSTELYVLVSGAVDLLRYIDGHEQVHGKAVAVDAFGEIGVLYQIPQPFTVRTTELSQILRLNKTSLMNVLQANPGDAQIIMDNLLMRLKGREDFGFECPCTDSRRFPNELVQGDYTRGSSSHECTNNSHEHSLMHEGECIDIRNSETSLRKVTNDHLVTKHSMIPEHDTREARAPARKGNLDIVEILLERDSNPNPNSRGWTQNALAKQPKYKSICDQKRIDENEKLDEFRIEIAEPEILLDRDSSTRNRRHDGIRSIKFPKAKISTNASSRNSSCPSDIESARLPKKRVTIQLLHGCRSTSQGRHGKLIILPDSLEELLKIAGEKFGGFNPTKVVNTENAEIDDINVIRDGDCLFLLGSDDENLCS* 778
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g01468 777 SUPERFAMILY cAMP-binding domain-like 305 498 IPR018490 -
Lapu6g01468 777 ProSiteProfiles cAMP/cGMP binding motif profile. 378 497 IPR000595 -
Lapu6g01468 777 ProSiteProfiles KHA domain profile. 699 777 IPR021789 -
Lapu6g01468 777 Pfam Ion transport protein 61 307 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Lapu6g01468 777 PANTHER POTASSIUM CHANNEL AKT1 27 499 IPR045319 GO:0005249|GO:0006813
Lapu6g01468 777 PRINTS EAG/ELK/ERG potassium channel family signature 107 116 IPR003938 GO:0005249|GO:0006813|GO:0016020
Lapu6g01468 777 PRINTS EAG/ELK/ERG potassium channel family signature 248 265 IPR003938 GO:0005249|GO:0006813|GO:0016020
Lapu6g01468 777 PRINTS EAG/ELK/ERG potassium channel family signature 274 285 IPR003938 GO:0005249|GO:0006813|GO:0016020
Lapu6g01468 777 PRINTS EAG/ELK/ERG potassium channel family signature 292 301 IPR003938 GO:0005249|GO:0006813|GO:0016020
Lapu6g01468 777 PRINTS EAG/ELK/ERG potassium channel family signature 73 80 IPR003938 GO:0005249|GO:0006813|GO:0016020
Lapu6g01468 777 PRINTS EAG/ELK/ERG potassium channel family signature 96 106 IPR003938 GO:0005249|GO:0006813|GO:0016020
Lapu6g01468 777 Gene3D - 61 301 - -
Lapu6g01468 777 SMART cnmp_10 378 495 IPR000595 -
Lapu6g01468 777 Gene3D Jelly Rolls 371 503 IPR014710 -
Lapu6g01468 777 CDD CAP_ED 378 491 IPR000595 -
Lapu6g01468 777 Gene3D Helix hairpin bin 302 368 - -
Lapu6g01468 777 FunFam Potassium channel KAT3 62 302 - -
Lapu6g01468 777 Pfam Cyclic nucleotide-binding domain 398 482 IPR000595 -
Lapu6g01468 777 Pfam KHA, dimerisation domain of potassium ion channel 698 767 IPR021789 -
Lapu6g01468 777 FunFam Potassium channel KAT2 366 502 - -
Lapu6g01468 777 SUPERFAMILY Voltage-gated potassium channels 55 301 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g01468 Lapu-Chr6 14472131 14476178 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu6g01468 1 768 Ion Channels AT4G18290 58.344 0.0 849
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g01468 K21867 - gmx:100811356 1371.3
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu6g01468 6 14472131 14476178 Lapu6g01468 6 14472131 14476178 ECH