Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g01462 ATGGGGAGGCTAATAACCACGACTAAGCCTCTCATCCTCCACTCCAAGCTCCTCTGTGTCTCTCTGCTCTATCTCTTCACCACTCTTTTCCTTGCTCTCTACACCACTCTCTCTCATTCCAAATGCTTCTTCCGATCCTCCCCCTTGGATCCTCTTCAGAATTCCCTCTTCTCTTACCCCTCTTCCTACGGAGAACACAAGTACGCTGTTTCAACCACCCGTTCTACATGCTCCTCCCCTGTTTTTTTCTCAGATTACTGGGATGTAGTGAAGGAGATCAAGAGTTTCCGCGAGACCAACCGGGCTTATTCAGGGTCTCTGCGGTATGTGCAGGGCAATGCTGATAGTTTCGGTGGGAATCTTAGCACCCTTGCCAGGTTTTCCTATTTTGATCATCAAAATGATAACACCGAAGTTCTTTGCGGATTTCTGAAGAAGTTTCCAGTCAGTGATTCTGATCGAATTGCGATGGAACAGTGTGATAGTGTGGTTGTGGTTTCAGCAATCTTCAATGATCACGATAAAATCCGCCAACCAAAAGGCCTTGGGTCCAGCACATTGCAGGAAGTGTGTTTTTTTATGTTTGTTGACGATGTTACCCTCAAAGGTCTTGAACATCACGGGTTGATTTCATTAAATTCAACAGAATACAATATAGGTGTGTGGAGGATCGTGAAGGTTGCTAAAGAGAGTTTGTATCAGAACCCAGCAATGAACGGGGTTATACCGAAGTATTTAGTCCACAGGCTATTCCCAAATTCCCAATTCAGCATTTGGCTAGACGCAAAGATGCAACTAATGGTTGATCCGTTGTTGTTGATTCATTCACTTGTTATATCTGATGATGTAGACATGGCTATATCAAAGCACCCTTATTATGTTCATACCATGGAAGAAGCAATGGCAACTGCAAGATGGAAGAAATTGTTGGATGTCAATGCCTTGAAGATACAAATGGAGACATACTGTGAAAATGGACTGCAACCATGGACCCCCAAAAAACAGCCCTATGAGTCAGATGTACCAGACAGTGCTTTGATATTGAGGAGACATGGACTTGGTAGCAATCTCTTCTCATGCCTTATATTCAACGAGTTGGAGACATTTAACCCAAGAGACCAATTACCCTTTGCATTTGTTAGAGATAAGATGAAGCCAAAGGTGAAGATGAACATGTTTGAGGTGGAAGTTTTTGAACAGGTGGCAGTGGAGTACCGACACAATCTGAAGAGCAGTGATGGGACCACTCTAAAGAAAATGTCGAGTTCAGGAAGAACCAAAAGGGCACACCCTGATTTGTTGTATGTGAATGGAAGTTGTTGCAGCAAGTGCCAGAAGTATCTTTCGATAATGTGGGGGGAATCATCGAATGATTAA 1377 0.435 MGRLITTTKPLILHSKLLCVSLLYLFTTLFLALYTTLSHSKCFFRSSPLDPLQNSLFSYPSSYGEHKYAVSTTRSTCSSPVFFSDYWDVVKEIKSFRETNRAYSGSLRYVQGNADSFGGNLSTLARFSYFDHQNDNTEVLCGFLKKFPVSDSDRIAMEQCDSVVVVSAIFNDHDKIRQPKGLGSSTLQEVCFFMFVDDVTLKGLEHHGLISLNSTEYNIGVWRIVKVAKESLYQNPAMNGVIPKYLVHRLFPNSQFSIWLDAKMQLMVDPLLLIHSLVISDDVDMAISKHPYYVHTMEEAMATARWKKLLDVNALKIQMETYCENGLQPWTPKKQPYESDVPDSALILRRHGLGSNLFSCLIFNELETFNPRDQLPFAFVRDKMKPKVKMNMFEVEVFEQVAVEYRHNLKSSDGTTLKKMSSSGRTKRAHPDLLYVNGSCCSKCQKYLSIMWGESSND* 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g01462 458 Pfam Protein of unknown function (DUF616) 113 407 IPR006852 -
Lapu6g01462 458 PANTHER ALKALINE CERAMIDASE-RELATED 11 412 IPR006852 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g01462 Lapu-Chr6 14437128 14440157 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g01462 - - vun:114187429 839.721
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu6g01462 6 14437128 14440157 Lapu6g01462 6 14437128 14440157 ECH
Lapu6g01462 6 14437128 14440157 Lapu3g03162 3 54981166 54991688 PCT