Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g01453 ATGAGGAGAAACTGCAACCTGGAACTTGCCCTTTTCCCTCCCTCCGATTCTGGCCCTCTCCACCACCCCAGGGTTCAAGAAGCTGCTGAGATCAGCCCAATGCAGAACTTCCTCCATCACCACCACCGCCAGGAACAGCAACAACCACTCACAATTTTCTACGATGGCAAGATTTGTGTTGCGGATGTCACAGAGCTTCAGGCAAAATCTATTTTAATGCTTGCAAATAGAAAATTGGAAGAAAGGGTGAAGACGGGAAGTGGGTCAGAGCCATGTTCACCAACAGTTATGCAATCTCCTAATCAATTGTATAGTCCTGGCAGTGGTCTTTCCATGAGAAAATCGTTGCAGCGCTTCCTTATGAAGAGAAAGAACAGGGTCCAAGAAGCATCCCCATACCATCACTAG 408 0.4755 MRRNCNLELALFPPSDSGPLHHPRVQEAAEISPMQNFLHHHHRQEQQQPLTIFYDGKICVADVTELQAKSILMLANRKLEERVKTGSGSEPCSPTVMQSPNQLYSPGSGLSMRKSLQRFLMKRKNRVQEASPYHH* 136
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g01453 135 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 29 133 IPR040390 -
Lapu6g01453 135 SMART tify_2 43 77 IPR010399 -
Lapu6g01453 135 Pfam Jas motif 113 133 IPR018467 -
Lapu6g01453 135 ProSiteProfiles Tify domain profile. 43 77 IPR010399 -
Lapu6g01453 135 MobiDBLite consensus disorder prediction 82 108 - -
Lapu6g01453 135 Pfam tify domain 45 76 IPR010399 -
Lapu6g01453 135 MobiDBLite consensus disorder prediction 88 108 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu6g01453 1 134 Tify Gene Family AT1G30135 42.336 1.97e-24 89.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Lapu6g01453 tify 3.3e-13 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g01453 - - gmx:100500349 232.261