Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g01446 ATGGAAGAGGATGAGATTCAAGCACAGGCAGCATGTAAGTTCCCTCGAGTTGGAAATGGAAGGAGCGACCAATACCAAGAGGAGGAGGAAGAAGGAGACATAAGAAGAAGAGGTATTGGTGGTGGTGGTGGTGGTGGTGGAGGAGGAGGAGGAGGAGGAAGTGATGCTAGCACAAACCATTTTCAAAGCAGTTGGCACCACTCTTCGAGAATCATAAGGGTGTCTCGAGCATCTGGTGGCAAAGACAGGCACAGCAAGGTGATGACCTCAAAGGGGTTAAGAGACAGAAGGGTTAGGCTATCTGTGACCACAGCCATTCAGTTCTATGACCTTCAAGATCGCTTGGGTTATGACCAGCCTAGTAAGGCTGTGGAGTGGTTAATCAATGCTGCTTCAGATGCTATCTCCGAGCTTCCGTCTCTTAACAATCCCTTCCCTGATACCCCCAAGCAGCCAAGTGATGAGAAAAGGCCAACTAGTGGTCAACGTGGTGGTCAACCACAGGCCTTTGATGATGCAGACGGGGACACCAATTTCCTCCAGCAAAGCCAGAACCAAAGCCAGAACCTCTCTCTCTCCAAGTCTGCTTGTAGCAGCACTTCCGAGACCAGCAAGGGTTCAGGTTTGTCCCTCTCAAGGTCTGAGATCCGTGTGAACCGAGTGAAGGCAAGGGAGAGGGCAAGGGTGAGAGCAGCAAAAGAGAAGGGAAAAGATAAGGACAAGGAGAAAGAGAAAGAGAAAGAGGAGTCCGGCATTGCACATCACCACCACCACCACAATGTGAACAACCCCAACCATATGTCTCACACTGCTTCCTTCACTGAGCTTCTCACTGGTGGGATTGGGAGCACAGTAACAGTTAACCCCACCACCACTGCAAGTCCTAATGGATCATCAGTTCATCAGATCCATGAGGGTCATGATGAGGCCAATCTATTCAACAAGGGAAGACAACAACACTGGTCTTCAACAGTGACACCTATGGACTACTTCAGCTCGGGAGGTCTCCTGGTGGGGCCTTCTTCATCATCTGCAAGAACTCAACACCAACACCAACACCAACACCAATCTTCTTCAGGACAGTTCCAATTGGGACATGCCCTTCCCATCTCACCATTCAGTGGAGAAAACCACTCAGATCAACTGCAGCATTTTTCCTTCATGCCAGACCACCTTAACATGCCAGCTGTGGTCACTTCTTCTTCTTCTGCTTCTCAGCCCAGCGGGGGTGACAATTACAACCTCAACTTCAGCATCTCTTCGGGCCTTGCTGGTTACAATAGGGGGACCCTTCAGTCCAATTCTCCGTCCTTTTTGCCTCACCTCCAGAGGTTTCAACCTTTAGACGGATCATCCAATCTACCTTTCTTCATTGGAGCTCCTGCTCCTTCGTCTGCTCCTCCAACCATTGACAGCAACAACAATAACAACCACCACCACCTTCAGTTCTCTCCCGTCTTCGATGGCCGCTTGCAACTTTGCTATGGCGATGGAACAAGGCATTCTGACCACAAGGGCAAGGGAAAGAACTAA 1533 0.499 MEEDEIQAQAACKFPRVGNGRSDQYQEEEEEGDIRRRGIGGGGGGGGGGGGGGSDASTNHFQSSWHHSSRIIRVSRASGGKDRHSKVMTSKGLRDRRVRLSVTTAIQFYDLQDRLGYDQPSKAVEWLINAASDAISELPSLNNPFPDTPKQPSDEKRPTSGQRGGQPQAFDDADGDTNFLQQSQNQSQNLSLSKSACSSTSETSKGSGLSLSRSEIRVNRVKARERARVRAAKEKGKDKDKEKEKEKEESGIAHHHHHHNVNNPNHMSHTASFTELLTGGIGSTVTVNPTTTASPNGSSVHQIHEGHDEANLFNKGRQQHWSSTVTPMDYFSSGGLLVGPSSSSARTQHQHQHQHQSSSGQFQLGHALPISPFSGENHSDQLQHFSFMPDHLNMPAVVTSSSSASQPSGGDNYNLNFSISSGLAGYNRGTLQSNSPSFLPHLQRFQPLDGSSNLPFFIGAPAPSSAPPTIDSNNNNNHHHLQFSPVFDGRLQLCYGDGTRHSDHKGKGKN* 511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g01446 510 MobiDBLite consensus disorder prediction 217 256 - -
Lapu6g01446 510 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 43 395 IPR005333 GO:0003700
Lapu6g01446 510 MobiDBLite consensus disorder prediction 1 68 - -
Lapu6g01446 510 MobiDBLite consensus disorder prediction 339 380 - -
Lapu6g01446 510 ProSiteProfiles R domain profile. 217 235 IPR017888 -
Lapu6g01446 510 MobiDBLite consensus disorder prediction 339 365 - -
Lapu6g01446 510 MobiDBLite consensus disorder prediction 175 214 - -
Lapu6g01446 510 Pfam TCP family transcription factor 79 235 IPR017887 -
Lapu6g01446 510 MobiDBLite consensus disorder prediction 22 37 - -
Lapu6g01446 510 MobiDBLite consensus disorder prediction 137 268 - -
Lapu6g01446 510 ProSiteProfiles TCP domain profile. 80 138 IPR017887 -
Lapu6g01446 510 Coils Coil 229 249 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g01446 Lapu-Chr6 14243057 14253110 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu6g01446 58 510 TCP Transcription Factor Family AT4G18390 41.423 3.89e-72 232
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Lapu6g01446 TCP 5.5e-40 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g01446 - - gmx:100787772 675.626
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu6g01446 6 14243057 14253110 Lapu6g01446 6 14243057 14253110 ECH