Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g01444 ATGATGTTAATTGAGAGTAGCTGTGGTCGTGATTCTGGGATGAGTTCAGAGACTGTGAATTCCACGCAACGAACTTCCATGAGCAACGAGAGCGTTTGCAGCACCAGCTTCAGCCGCCTCTCCTTCGACCTCCCCCCTTCCTCCTCCTCGCCGGAGAGCCTATTCGTCAAGCCGCACCGCTCATCCGACTTCGCATACTCCGCCATCTTCCGCCGCAAGTCCGCCCTCACCTTCCGCGACTTCCACCTCATCCGCCGCATCGGCGCCGGCGACATCGGCACCGTATACCTCTGCCGCCTCCGCCACGATGAGGACGAGTGCTTCTACGCGATGAAGGTGGTGGACAAGGAGGCGGTGGCGCTGAAGAAGAAGGCGCAGAGAGCGGAGATGGAGAGAAAGATTCTGAAGATGGTGGACCACCCCTTCCTCCCTACGCTCTACGCGGAGTTCGAGGCCTCGCATTTCTCTTGCATTGTGATGGAGTATTGCTCCGGTGGAGACTTGCACTCCCTTCGACACAACCACCCTAACAAACGCTTCTCTCTCTCCTCTTCCAGGTTTTACGCGGCTGAAGTACTGGTGGCGTTGGAGTATCTCCACATGCTGGGAATAATCTACAGGGATCTAAAGCCAGAAAACGTGTTGGTAAGATCAGACGGTCACATCATGCTTTCTGATTTCGATCTCTCTCTCTGCTCCCATGCAATCCCCGCCGTTGAATCCCCTGACTGTTCGCTAGATCCTGCATTCGCACGCGCGTTACCCTACACCCGCCAGTACTCCACTCCCTTCTCCTGCCTCTCCAACCGCGTCTTCCGCTCCAGGAAGGTCCAAACCCTCCAACCCAACCGCCTCTTTGTGGCCGAACCGGTTGGGGCCCGCTCCTGCTCCTTCGTGGGGACGCACGAGTACGTCTCGCCGGAAGTGGCCTCCGGGAACTCCCACGGCAACGCCGTCGACTGGTGGTCCTTCGGGATATTCATCTACGAGATGGTGTACGGTCGCACACCCTTCGCAGGCCCATCGAACGAGGCTACGCTGCGCAACATCATAAAAAACCCCCTCGCCTTTCCCACCGCCACGCCCTCCACCACGCTTGAAACGCACGCGCGGGACCTTATCTCCGGGTTGCTCAACAAGGACCCGAACCGCAGGCTTGGGTCGAAGCGCGGCGCCGCCGAAGTCAAGAAGCACCCTTTCTTCGCCGGGCTCAATCTGGCGCTCATACGAATGGTCACGCCGCCGGAGGTTCCTTCCCTCAGAAGACAGAAAACGACGCCGTTTTACCCCACTAACGATAACGGCAACGTAAATAACAGTAGACATGAGCTGACGCCGTTTGATTACTTTTGA 1353 0.5772 MMLIESSCGRDSGMSSETVNSTQRTSMSNESVCSTSFSRLSFDLPPSSSSPESLFVKPHRSSDFAYSAIFRRKSALTFRDFHLIRRIGAGDIGTVYLCRLRHDEDECFYAMKVVDKEAVALKKKAQRAEMERKILKMVDHPFLPTLYAEFEASHFSCIVMEYCSGGDLHSLRHNHPNKRFSLSSSRFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSHAIPAVESPDCSLDPAFARALPYTRQYSTPFSCLSNRVFRSRKVQTLQPNRLFVAEPVGARSCSFVGTHEYVSPEVASGNSHGNAVDWWSFGIFIYEMVYGRTPFAGPSNEATLRNIIKNPLAFPTATPSTTLETHARDLISGLLNKDPNRRLGSKRGAAEVKKHPFFAGLNLALIRMVTPPEVPSLRRQKTTPFYPTNDNGNVNNSRHELTPFDYF* 451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g01444 450 Pfam Protein kinase domain 81 231 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu6g01444 450 Pfam Protein kinase domain 296 401 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu6g01444 450 Gene3D Phosphorylase Kinase; domain 1 79 162 - -
Lapu6g01444 450 MobiDBLite consensus disorder prediction 419 440 - -
Lapu6g01444 450 MobiDBLite consensus disorder prediction 9 25 - -
Lapu6g01444 450 CDD STKc_phototropin_like 79 422 - -
Lapu6g01444 450 Gene3D Transferase(Phosphotransferase) domain 1 294 419 - -
Lapu6g01444 450 FunFam serine/threonine-protein kinase D6PK-like 293 419 - -
Lapu6g01444 450 FunFam protein kinase PINOID 163 231 - -
Lapu6g01444 450 SMART serkin_6 81 401 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu6g01444 450 ProSiteProfiles Protein kinase domain profile. 81 401 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu6g01444 450 Gene3D Transferase(Phosphotransferase) domain 1 163 230 - -
Lapu6g01444 450 ProSitePatterns Serine/Threonine protein kinases active-site signature. 204 216 IPR008271 GO:0004672|GO:0006468
Lapu6g01444 450 SUPERFAMILY Protein kinase-like (PK-like) 61 425 IPR011009 -
Lapu6g01444 450 Coils Coil 111 131 - -
Lapu6g01444 450 FunFam protein kinase PINOID 2 79 162 - -
Lapu6g01444 450 MobiDBLite consensus disorder prediction 424 440 - -
Lapu6g01444 450 PANTHER FLIPPASE KINASE 1-RELATED 20 421 - -
Lapu6g01444 450 MobiDBLite consensus disorder prediction 1 25 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g01444 Lapu-Chr6 14194012 14196918 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu6g01444 2 450 AGC Kinase Gene Family AT2G34650 66.304 0.0 587
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Lapu6g01444 Pkinase 4e-36 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g01444 - - gmx:100795536 788.875