Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g01429 TGGGAACAAGTGGAGCGGGCCCACGGGCCGAAACATAGTTTGGGCTTCGGGAGGGATGAGAGAGACTCTAGGGTTAGGGTTTATGACGTGCCCTTGCCATTAGTTTTACAATTTACATCACATTTGGTTGCGCCTCTGTTCTCTGCCACCGCTGTGTCTATCGCTACCATGCCTAAGCAAATCCACGAGATTAAGGACTTCCTTCTCACTGCCAGAAGGAAGGATGCGAGGTCGGTGAAGATCAAGAGGAGCAGAGATGTGGTTAAGTTCAAGGTTAGATGCTCCAAGTACCTCTACACGCTCTGTGTGTTTGACCCAGAGAAAGCTGATAAATTGAAGCAATCACTTCCTCCAGGTTTGAGTGTTCAAGACCTGTAA 378 0.4868 WEQVERAHGPKHSLGFGRDERDSRVRVYDVPLPLVLQFTSHLVAPLFSATAVSIATMPKQIHEIKDFLLTARRKDARSVKIKRSRDVVKFKVRCSKYLYTLCVFDPEKADKLKQSLPPGLSVQDL* 126
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g01429 125 Gene3D - 57 125 IPR038464 -
Lapu6g01429 125 PANTHER 60S RIBOSOMAL PROTEIN L38 57 124 IPR002675 GO:0003735|GO:0005840|GO:0006412
Lapu6g01429 125 FunFam 60S ribosomal protein L38 57 125 - -
Lapu6g01429 125 Pfam Ribosomal L38e protein family 58 124 IPR002675 GO:0003735|GO:0005840|GO:0006412
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu6g01429 57 125 Cytoplasmic Ribosomal Protein Gene Family AT3G59540 94.203 3.52e-43 134
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g01429 K02923 - gmx:100305707 140.584