Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g01419 ATGGTTGTGGAAGATTCCCAAAAATCAACCATCACCGATGACCAAAACCCTAGCAGGGTCGACAACGACGACGACGACGACGATCTCGAAGATGGGGAGATCCTCGACGATGGCGACGACGCCGCCTCCGCTGCCTCCAAGCCTCCGTCCGCCCTCCTCCGCAACCCCCACCCTCTCGAGAATTCCTGGACCTTCTGGTTCGACAACCCTTCGGCCAAGTCCAAACAAGCCGCATGGGGCAGTTCCATTCGACCCATCTACACTTTCGCCACCGTCGAAGAGTTTTGGAGCATTTACAATAACATTCACCACCCGAGCAAGTTGGGTGTGGGGGCGGACTTTCACTGCTTCAAGCATAAGATTGAGCCCAAATGGGAGGACCCTATCTGCGCCAATGGTGGAAAATGGACTATGACGTTCCAAAGGGGAAAATCTGATACCAGTTGGTTGTATACGTTGTTGGCGATGATCGGAGAACAGTTTGATCACGGAGATGAAATTTGTGGAGCTGTTGTGAATGTCAGAAATAGGCAGGATAAAATTTCTATTTGGACTAAGAATGCTTCAAATGAAGCTGCTCAGACGAGCATTGGAAAGCAGTGGAAGGAGTTTCTTGATTACAATGAAACAATAGGCTTCATATTTCATGAGGATGCAAAGAAGCATGAGAGAGGTGCTAAAAATAAATACGCCATATGA 699 0.4878 MVVEDSQKSTITDDQNPSRVDNDDDDDDLEDGEILDDGDDAASAASKPPSALLRNPHPLENSWTFWFDNPSAKSKQAAWGSSIRPIYTFATVEEFWSIYNNIHHPSKLGVGADFHCFKHKIEPKWEDPICANGGKWTMTFQRGKSDTSWLYTLLAMIGEQFDHGDEICGAVVNVRNRQDKISIWTKNASNEAAQTSIGKQWKEFLDYNETIGFIFHEDAKKHERGAKNKYAI* 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g01419 232 MobiDBLite consensus disorder prediction 19 38 - -
Lapu6g01419 232 ProSitePatterns Eukaryotic initiation factor 4E signature. 113 136 IPR019770 GO:0003723|GO:0003743|GO:0005737|GO:0006413
Lapu6g01419 232 MobiDBLite consensus disorder prediction 1 16 - -
Lapu6g01419 232 Gene3D RNA Cap, Translation Initiation Factor Eif4e 50 232 IPR023398 -
Lapu6g01419 232 MobiDBLite consensus disorder prediction 1 55 - -
Lapu6g01419 232 Pfam Eukaryotic initiation factor 4E 58 210 IPR001040 GO:0003723|GO:0003743|GO:0006413
Lapu6g01419 232 FunFam Eukaryotic translation initiation factor 4E 49 232 - -
Lapu6g01419 232 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4E RELATED 22 222 IPR001040 GO:0003723|GO:0003743|GO:0006413
Lapu6g01419 232 SUPERFAMILY eIF4e-like 53 227 IPR023398 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g01419 Lapu-Chr6 13976063 13978945 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu6g01419 1 230 Eukaryotic Initiation Factors Gene Family AT4G18040 65.546 1.63e-113 323
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g01419 K03259 - gmx:100793288 402.134
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu6g01419 6 13976063 13978945 Lapu6g01419 6 13976063 13978945 ECH