Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g01397 ATGGGAGTTGCCAATTTCTCTGTCTTCCTTTTTATTGCTCTAAGTTGCTTCCAATTGCTGAGAGTTTCTGCATCAAAATTACCTCAAGAAGAAGTTGACGCTCTTGGAGAAATTGTGACTGTGATGGGCTCGGTATACTGGAAGTTTGATGCTGATTCCTGCAATATTAAAATGGTTGGACTAACACAAGAAGCACCAGCTGAATCAGAAAGAAGCATTGATTGTGACTGCAGTTTTGAAGATAATACGGTCTGTCATGTTGTGAAAATGACTCTCAAGCGCCTTAGTCTACCTGGCACACTCCCACCTCAACTGGCCAAGCTATCTTTTCTCCGAGAAGTAGATTTTGCTTACAATTGCTTCACCGGTTCAATTCCAGAGGAATGGGCTTCAATGAAATTAGCTTCAATTTCTCTTCTTGTGAATCGCTTATCTGGGGAAATTCCAAAGCATCTAGGAAATATTACTACTCTTACATACCTGATGCTTGAAGCAAATCAATTTTCTGGTGTTATTCCACCTGAGCTTGGAAAACTAATATACTTGCAGACCTTGGTTCTGTCTTCCAATCAATTGACTGGGAACTTACCACTTACACTTGCTGGATTACAAAATTTGACTGACTTTAGAATAAATAATAACAATTTTACTGGAACAATACCTAGTTTCATACAGAACTGGCAACTTCTCCAGAGACTAGAAATGTATGCAACTGGACTAGAGGGCCCCTTCCCATCAAATATCTCTCTCTTGAAGAATTTAGCTATGCTAAGAATCAGTGATGTAGAAAGTTCTGCCCAGGTCTTTCCTCTTCTGCAGAACATGACAAACTTGACTATATTGGTTCTAAGGAATTGCAACTTATCTGGTGTTATACCTTCATACGTCTGGACAATAAGGAATTTGGTGGTTTTGGATGTCAGTTTTAACATGCTCTTTGGGGAAATTCCATCAATTATAAGTGCAAGGCGTCTAAGATTTATCTACCTAACAGGTAATATGCTTAGTGGCAATATACCGAATTCAATCCTGAAGGATGGAAGTAGCATTGATCTATCATACAACAACTTTACTTGGCAAGACAATGAGGAGTCTGTTTGTCAGGATGGCATGAACTTGAATCTGAATTTATTCAGAAGCTCGATTCAGAAGAATAAGTTAGAGGAGTATGTTCCTTGTTCGAAGAATTTCAGCTGTCCACGCTTTTCAAGTTGTTTACATGTTAACTGTGGTGGGAAGGATGTAAGTGTAAAAGATGATAAAGGAGAAAACCTTTATGTGGGAGATGCAGATGTTCAGGGTGGCACTGCAACTTATTTCTACAGTAATGACCACTGGGGATTTAGTAGCACTGGGGACTTCATGGATGATTTTGAGTCCCAGAACATACGTTACACTGTATCTCTGCCATCTTCAAATATGCCAGAATTATATAAAACAGCGCGTGTATCTCCAATTACACTGACTTATTTCCACAACTGCATGGAAAATGGGAACTATACTGTAAACCTTCACTTTGCTGAGATACAGTTTACAAATGATAAAACATATAAAAGTCTTGGGAAGCGCATATTTGATATCTATGTTCAGGGAAGCATGACTCACAAAAACTTCAATATAGAAAATGAGACAAATGTTACTGAAAAAGCATTGGTACTGCCTATATACAATATCAGCATCACAGATAACGTCTTGGAGATTAGGTTCTACTGGGCTGGAAAAGGAACGACTAGAATTCCTGATGCTGGAGTTTATGGTCCCCTTGTATCAGCTATATCTGTGGTCTCAGACTCTAGAATTTGCTCAAATGGAGAAAAGAAAGTTGTTGTTTCGATAATCATTGCCATTGTAGCCTGTGCTCTATGCTTAGTGCTGTTTATATCTGGACTCATTTGGTGGAAGTGGAAAGGTTTTTTCAGAGGGAAACTGCGAAAGAAAGAAGGTGCAAAAGATGGAGATATTCAGACAGGTAATTTTAGTTTGGAGGATATCAGAGCTGCCACCAATGACTTCTCTTCTGCTAATAAGATTGGAGAAGGCGGTTTTGGTCCCGTATACAAGGGTCAATTGCTAGATGGTACTTTTATAGCGGTCAAGCAATTGTCATCAAAATCACGGCAGGGAAACCGTGAATTTATAAATGAAATAGGCTTGATATCTTGTGTGCAACATCCCAACCTTGTAAAGCTTCATGGATACTGTGCTGAAGGGGAACAACTTTTGTTGGTATATGAGTACATGGAAAATAACAGCCTTGCCCGAGCTTTATTTGGTAGTGAGAACCATCAGCTTAGATTGGATTGGCCCACAAGGTTTAGGATTTGCGTTGGCATTGCAAAAGGTCTAGCATTTCTCCATGATGAGTCAAGATTCAAGATAGTGCACAGAGATATCAAGGCTTCTAATGTGTTACTCGATGGTGATTTGAATCCAAAAATATCTGACTTTGGCTTGGCGAGGCTTGATGAAGCAGAGAAGACGCATATCAGCACCCGAGTTGCTGGGACTATAGGATATATGGCACCAGAATATGCATTATGGGGCTATCTTACATATAAGGCGGATGTTTACAGTTTTGGAGTTGTAGCATTAGAAATTGTTAGTGGGAAAAGCAATAACAATTATTTACCAGACGATGGAAGTGCTTGTCTTTTGGATTGGGCATGTCAGTTAAATCAAGCTAAGAAATTAGTGGGGCTTATTGACGAAAGGTTGGGACCAGACCTTAATAAAACGGAAGTAGGAAAGGTGGTCAGAATAGCTCTCCTGTGCACAAATGCTTCTCTATCACTTAGGCCTACGATGTCTGAGGTGGTGAATATGCTTGAAGGACAATTAGATATTCCTGATGCAATACCAGAACCAAGTTCCTACAGTGAGGATTTAAGGTTCAAAGCCTTAAGGGACCTCCATCAACATCGATCAAAGCAGAGTTCGAGAGGTAACCAGAGCCAGAATTCATCGACTCATACATTCAGCTCAGCATCTGCTGGTAATACTCACTCTAGTAGTAATATTGAGGATCATTGTTCAGTTGACAATAGTTAG 3048 0.397 MGVANFSVFLFIALSCFQLLRVSASKLPQEEVDALGEIVTVMGSVYWKFDADSCNIKMVGLTQEAPAESERSIDCDCSFEDNTVCHVVKMTLKRLSLPGTLPPQLAKLSFLREVDFAYNCFTGSIPEEWASMKLASISLLVNRLSGEIPKHLGNITTLTYLMLEANQFSGVIPPELGKLIYLQTLVLSSNQLTGNLPLTLAGLQNLTDFRINNNNFTGTIPSFIQNWQLLQRLEMYATGLEGPFPSNISLLKNLAMLRISDVESSAQVFPLLQNMTNLTILVLRNCNLSGVIPSYVWTIRNLVVLDVSFNMLFGEIPSIISARRLRFIYLTGNMLSGNIPNSILKDGSSIDLSYNNFTWQDNEESVCQDGMNLNLNLFRSSIQKNKLEEYVPCSKNFSCPRFSSCLHVNCGGKDVSVKDDKGENLYVGDADVQGGTATYFYSNDHWGFSSTGDFMDDFESQNIRYTVSLPSSNMPELYKTARVSPITLTYFHNCMENGNYTVNLHFAEIQFTNDKTYKSLGKRIFDIYVQGSMTHKNFNIENETNVTEKALVLPIYNISITDNVLEIRFYWAGKGTTRIPDAGVYGPLVSAISVVSDSRICSNGEKKVVVSIIIAIVACALCLVLFISGLIWWKWKGFFRGKLRKKEGAKDGDIQTGNFSLEDIRAATNDFSSANKIGEGGFGPVYKGQLLDGTFIAVKQLSSKSRQGNREFINEIGLISCVQHPNLVKLHGYCAEGEQLLLVYEYMENNSLARALFGSENHQLRLDWPTRFRICVGIAKGLAFLHDESRFKIVHRDIKASNVLLDGDLNPKISDFGLARLDEAEKTHISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGKSNNNYLPDDGSACLLDWACQLNQAKKLVGLIDERLGPDLNKTEVGKVVRIALLCTNASLSLRPTMSEVVNMLEGQLDIPDAIPEPSSYSEDLRFKALRDLHQHRSKQSSRGNQSQNSSTHTFSSASAGNTHSSSNIEDHCSVDNS* 1016
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g01397 1015 SUPERFAMILY L domain-like 83 342 - -
Lapu6g01397 1015 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 403 597 - -
Lapu6g01397 1015 SUPERFAMILY Protein kinase-like (PK-like) 657 944 IPR011009 -
Lapu6g01397 1015 FunFam probable LRR receptor-like serine/threonine-protein kinase At1g53430 640 746 - -
Lapu6g01397 1015 FunFam Putative LRR receptor-like serine/threonine-protein kinase isoform A 197 263 - -
Lapu6g01397 1015 Gene3D Ribonuclease Inhibitor 197 265 IPR032675 -
Lapu6g01397 1015 MobiDBLite consensus disorder prediction 971 1015 - -
Lapu6g01397 1015 Gene3D - 403 599 - -
Lapu6g01397 1015 Pfam Protein tyrosine and serine/threonine kinase 674 942 IPR001245 GO:0004672|GO:0006468
Lapu6g01397 1015 FunFam Putative LRR receptor-like serine/threonine-protein kinase 747 954 - -
Lapu6g01397 1015 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 17 980 - -
Lapu6g01397 1015 Gene3D Ribonuclease Inhibitor 266 370 IPR032675 -
Lapu6g01397 1015 Gene3D Ribonuclease Inhibitor 47 196 IPR032675 -
Lapu6g01397 1015 Pfam Malectin domain 405 592 IPR021720 -
Lapu6g01397 1015 ProSiteProfiles Protein kinase domain profile. 671 946 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu6g01397 1015 CDD STKc_IRAK 677 944 - -
Lapu6g01397 1015 FunFam Probable LRR receptor-like serine/threonine-protein kinase RFK1 33 196 - -
Lapu6g01397 1015 MobiDBLite consensus disorder prediction 977 1015 - -
Lapu6g01397 1015 Gene3D Transferase(Phosphotransferase) domain 1 747 950 - -
Lapu6g01397 1015 Gene3D Phosphorylase Kinase; domain 1 640 746 - -
Lapu6g01397 1015 FunFam Probable LRR receptor-like serine/threonine-protein kinase RFK1 265 386 - -
Lapu6g01397 1015 SMART serkin_6 671 942 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu6g01397 1015 ProSitePatterns Serine/Threonine protein kinases active-site signature. 793 805 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g01397 Lapu-Chr6 13747286 13758202 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu6g01397 1 837 Receptor kinase-like Gene Family AT1G29750 57.995 0.0 1004
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Lapu6g01397 PK_Tyr_Ser-Thr 9.6e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g01397 - - qsu:111995633 1348.57