Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g01365 ATGGATCAAAACAGAAGCAAAGAAAGAGGTGAGATATTGGGTCCGGTTTATGAAGGGGTAGATGGGAATTTGAGTAATTTGGTTGAAGGGGTAGTTATTGATGCAGTAGATGGGAACAGCTTGGGTGGCAGAGTTGTTATAAGCGGAGAAGCAGGAACTTCAGGAGAGGTGGGTAAGGATTTGGGATCTGAAAAGGAGCTAAAGGAGGGGCTTGAGGAAGTTTATGATCAGGGCAAGCATGATCAAGAAAATATCAGTGGTAATGAATTACTTGGGGTTGATCAGGGAACTAGTTATAATTCAAACCATGTGGTTAATCAGGAAGTGATTGAAACTGTGGTTGTGATTGAGTCTTTTGAGACTGAGTACGTGAATGAGGATAATAAGAAATTGGAAGCAAAAGTTGATGAATCAGGGTTGAACTTGGCATCCATGAAAGTACCAGAAGGAGCGTCTGAAACTGATAAAAATTCATGTGTGATTGATATAAAATGCAGCAGCCGCAAAAAGATTTCTGAGAATTCCGAAGGTGAGCAGATTTGCAGGATTTGCCATCTGGCTTCTGTGCTGCCATCGGATGAAGGTGAAACAGGTATTGGCCCTGCTGCTGGTAGTGCTACGAGTTCAGATTTGATTCAGCTTGGTTGTGCATGTAAAGATGAGCTAGGCATTGCACATGTTCATTGTGCTGAGGCGTGGTTCAAGCTTAAGGGGAACAGGTTATGTGAAATATGTGGTGAGACTGCAACAAATGTTTCGGGTGTTACTAATTATGAATTTATGGAAAAGTGGAATGAAAGAAGGTTCATGGAAGACGATGGCAACTCACCCCGCAGGTTTGGTGGATGCTGGCGAGGACAGCCATTTTGTAACTTCTTGATGGCATGCCTGGTAATAGCTTTTGTTCTGCCATGGTTTTTTCGTGTAAATATGTTCTAG 939 0.4249 MDQNRSKERGEILGPVYEGVDGNLSNLVEGVVIDAVDGNSLGGRVVISGEAGTSGEVGKDLGSEKELKEGLEEVYDQGKHDQENISGNELLGVDQGTSYNSNHVVNQEVIETVVVIESFETEYVNEDNKKLEAKVDESGLNLASMKVPEGASETDKNSCVIDIKCSSRKKISENSEGEQICRICHLASVLPSDEGETGIGPAAGSATSSDLIQLGCACKDELGIAHVHCAEAWFKLKGNRLCEICGETATNVSGVTNYEFMEKWNERRFMEDDGNSPRRFGGCWRGQPFCNFLMACLVIAFVLPWFFRVNMF* 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g01365 312 PANTHER ZINC FINGER, RING-CH-TYPE 65 312 - -
Lapu6g01365 312 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 164 256 IPR013083 -
Lapu6g01365 312 Pfam RING-variant domain 207 245 IPR011016 GO:0008270
Lapu6g01365 312 ProSiteProfiles Zinc finger RING-CH-type profile. 173 252 IPR011016 GO:0008270
Lapu6g01365 312 SUPERFAMILY RING/U-box 177 248 - -
Lapu6g01365 312 SMART ringv_2 180 246 IPR011016 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g01365 Lapu-Chr6 13447708 13450335 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu6g01365 161 311 C3H Transcription Factor Family AT5G05830 40.385 1.06e-31 115
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g01365 - - vra:106775190 524.628