Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g01361 ATGAAGCCCTTTCGCACGTTCTTCATTCTCCTTCTGGTTGGGCTCGTGGAATCTAAATATTATTCATGCAAAAATGAAGACCAGCTGCTGGTGTCAAAGGCGTTTCAATCTGTGTCTGGATTCAACTCTTCCTGGTTCCAAAGCGGTTCTAATTGTTCAAATGCTGATATTATTAAAAGACTAAATCTTTCCTTCAAGAACCTAAGTGGAATCATTTCGTGGAAGTATCTGAGGAACGTGTCCAAGTTGGAGGTTCTAGATCTGTCTGGGAATTTTCTACAAGGGCAGGTACCAAACTGGTTGTGGACAAGCTCAACCTTGTTAGTAGTGAACCTTTCCAACAACAGGTTCGGAGGGAGCATTAACCCCACTTCCCAAAACGATTCCTTCTCATCGCTGAAATATCTCAATCTCTCATACAACAGGTTCACTAACCAGCTTCATCTCTCTGGTTTTTCAAACCTTAAAATCCTTGATCTTTCACACAACAACCTCAGAACTTTGCCTTCGGGGTTCCAAAACCTCACCAATCTACACCACCTTAATCTCTCCAACTGCAACATCAAAGGAACCGTAAAACCTATTTCTTCCCTAACCTCACTATCCTTCTTGGACCTTTCAAACAACTCTTTGAACGGTAGCTTCCCCTCGGATTTCCCTCCCCTGAACACCATTAAATTCTTGAACATCTCCCACAACAACTTCAAAGCATCCACCGCATTAGACAGATTCAAAAAGTTCGGCCAATCAGCGTTCATTCACGCTGGAAACAATTTCAGCTATAACGCATTCAAAACGCCAAAGCTTGGTGCAACCTCAACGTCAGATTCAACTTCAACCCCACCACATAAACAGTCCCACCACATACAGGCGGACAAGAAGAGACCAAAAGAAAAACAAAAGTCAAAACAGAAATCGAGAGGCATGATTGCGGCCTTGTCGTGTGCCTCGGCACTCGTGGTTGTCGGATTGTGCATGTGCGTGGTGTGGCGTTGCAGAAGGAAGAGGCAATTGGCGAAAAGGAACAAGTGGGCGATCTCGAAGCCGGTCCCAGTGAGCATGAAGATGGAGAAATCGGGACCGTTCGCGTTCGAGACAGAGTCAGGGACATCATGGGTGGCTGACCTGAAAGAACCCTCTTCCGCACCCGTGGTCATGTTCGAGAAGCCTCTCATGAACCTCACCTTCGTGGACCTCATCGCTGCCACGTCACACTTCGGCAAAGACTCTCTCCTGGCAGAGGGCAGGTGTGGGCCCGTGTACCGCGCTGTCTTAACCGGAGACATCCACGTGGCAATCAAAGTCATCGAAAACGCCAGAGACGTCCATCATGATGACGCTGTCGCTCTCTTCGTTGACCTTTCCCAACTCAAACACCCCAATCTCTTGCCCCTCTCCGGTTACTGTATTGCAGGGAAGGAGAAGCTGGTGTTGTACGAGTTTATGTCCAACGGAGATTTGGGTAGGTGGTTGCAGGAGCTCCCAGCGGGGGAGACTAACGTCGAGGATTGGAGTGCTGACACGTGGGAGATTATTCAAAACGGCGCCGTTTCTCGAGCCTCACCGCCTGAAAAGATGGGCTGGCCAATACGCCACCGTATTGCGGTCGGCGTGGCGCGTGGATTGGCGTTTCTTCACCACGCGGGCTCCAGGCCCGTCGTGCACGGCCATCTCGTCACCTCCAACGTCCTTCTCGGCGACGACTTCGAGCCGCGAATTGCGGATTTCGGCTTCCGGAAGTTTGGAAGGGAGAGCGCTGCCGCCGCCGCGAATTGGTCGACGGAGACAGATGTTTACTGTTTCGGGGTGGTGCTGATGGAACTACTGACGGGGAGGGGGGGCACTGCGGAGACGGTGGTTTGGGTGAGGAAGGCGGTGAGGGAGGGACACGCGGTGAAGGCGTTGGATGAAAGGCTGAAACTCGGGGGCGGCGACTCGGAGAGTGAGATGGTGGAGAGCCTCCGAGTAGCGTATTTGTGTACGGCCGAGTCGCCAGGGAAGAGGCCCACCATGCAGCAGGTATTGGGCCTGCTCAAAGATATTCACCCGAGTCACGGACTCGACTGA 2067 0.5143 MKPFRTFFILLLVGLVESKYYSCKNEDQLLVSKAFQSVSGFNSSWFQSGSNCSNADIIKRLNLSFKNLSGIISWKYLRNVSKLEVLDLSGNFLQGQVPNWLWTSSTLLVVNLSNNRFGGSINPTSQNDSFSSLKYLNLSYNRFTNQLHLSGFSNLKILDLSHNNLRTLPSGFQNLTNLHHLNLSNCNIKGTVKPISSLTSLSFLDLSNNSLNGSFPSDFPPLNTIKFLNISHNNFKASTALDRFKKFGQSAFIHAGNNFSYNAFKTPKLGATSTSDSTSTPPHKQSHHIQADKKRPKEKQKSKQKSRGMIAALSCASALVVVGLCMCVVWRCRRKRQLAKRNKWAISKPVPVSMKMEKSGPFAFETESGTSWVADLKEPSSAPVVMFEKPLMNLTFVDLIAATSHFGKDSLLAEGRCGPVYRAVLTGDIHVAIKVIENARDVHHDDAVALFVDLSQLKHPNLLPLSGYCIAGKEKLVLYEFMSNGDLGRWLQELPAGETNVEDWSADTWEIIQNGAVSRASPPEKMGWPIRHRIAVGVARGLAFLHHAGSRPVVHGHLVTSNVLLGDDFEPRIADFGFRKFGRESAAAAANWSTETDVYCFGVVLMELLTGRGGTAETVVWVRKAVREGHAVKALDERLKLGGGDSESEMVESLRVAYLCTAESPGKRPTMQQVLGLLKDIHPSHGLD* 689
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g01361 688 Pfam Leucine Rich Repeat 82 100 IPR001611 GO:0005515
Lapu6g01361 688 FunFam Putative LRR receptor-like serine/threonine-protein kinase 367 481 - -
Lapu6g01361 688 ProSiteProfiles Leucine-rich repeat profile. 154 176 IPR001611 GO:0005515
Lapu6g01361 688 Gene3D Transferase(Phosphotransferase) domain 1 512 686 - -
Lapu6g01361 688 Gene3D Phosphorylase Kinase; domain 1 366 481 - -
Lapu6g01361 688 PRINTS Leucine-rich repeat signature 155 168 - -
Lapu6g01361 688 PRINTS Leucine-rich repeat signature 198 211 - -
Lapu6g01361 688 SUPERFAMILY Protein kinase-like (PK-like) 383 678 IPR011009 -
Lapu6g01361 688 SMART LRR_typ_2 80 104 IPR003591 -
Lapu6g01361 688 SMART LRR_typ_2 198 221 IPR003591 -
Lapu6g01361 688 SMART LRR_typ_2 152 174 IPR003591 -
Lapu6g01361 688 Gene3D Ribonuclease Inhibitor 26 125 IPR032675 -
Lapu6g01361 688 Pfam Protein tyrosine and serine/threonine kinase 410 675 IPR001245 GO:0004672|GO:0006468
Lapu6g01361 688 Gene3D Ribonuclease Inhibitor 126 269 IPR032675 -
Lapu6g01361 688 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 50 681 - -
Lapu6g01361 688 MobiDBLite consensus disorder prediction 270 285 - -
Lapu6g01361 688 Pfam Leucine rich repeat 132 188 IPR001611 GO:0005515
Lapu6g01361 688 ProSiteProfiles Protein kinase domain profile. 406 685 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu6g01361 688 MobiDBLite consensus disorder prediction 270 305 - -
Lapu6g01361 688 SUPERFAMILY L domain-like 53 238 - -
Lapu6g01361 688 FunFam Calmodulin-binding receptor kinase CaMRLK 136 241 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g01361 Lapu-Chr6 13404903 13408535 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu6g01361 57 681 Receptor kinase-like Gene Family AT5G07280 30.827 4.49e-70 246
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VII-2 Lapu6g01361 PK_Tyr_Ser-Thr 4.2e-23 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g01361 - - gmx:100778920 1143.64