Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g01358 ATGGCCAACCCTGTGGTGGCAAGATTCTCTGAGTTCTACGGCAAGTGGACTGGGAAGCTTGAGGATATTCTCCACCAGCTTCTCCAGGTGTCCAACCAGAGAACTGAGGTGGTGAAGACTAACCAAGAGCTGCAAGCTTTGGTGTCCATAGTGACATCCCATTTGAAGGAATACTACACTACCAAATGGGCTGCTGCTCGTGATAATGTTCTGATTTTCTTTTCTCCCCCGTGGCTGAATCCTTTTGAGCATTCTCAGCTTTGGATGACAGGGTGGAAGCCCTCCATCGTGTTCAGGCAGGTGGAGACTCTGAAGAAGGGAAAAGTCTTGGTGATGACGGAGGATCAGGAGAAGAAGACGGAGGAGCTGAAGATGAGGATGAGAATGGAGGAGGAGAAGGTGGAGAGGGAGATGGAGAGGCAGCAGGTGGCCATGGCAGACCGCAAGATTGTGGGGTTGGCCAAGCTCACGAGCCGTGCAAGGAGCGATGGTGGTGGTGGCGATGGGACGGATGCTGCTGCCGAAGATGCACTGAAGGAGGTTCTTGCAGGGTTGGAGAGGGTCATGAAGGGTTCCGATTGCGTGAGGCTCAAGACACTCAAAGGGGTGTTGGATTTGCTTAGCCCAATGCAGAGTGTGGACTTCTTGGCTGCCCATATAGCTGCGCAGCTGCGAGTCATGCAATGGGGGAAGCAGAACAAGGACGAGGCTGGGACCGTACTCAAGGTGAATCAGGCCAAAAAGGAAAAGTCAACAGCAGCTCAACACCTGCTTAAGGTGTCACATGGTAGTGTAGTGATACACAGGACGGTAGTGCTGAGTGGTATAGTTATATCCGCTGTGAATAGGCATGAGAGAGGAGTTGAAGGGAGAGGCATTGTTTGTGTTGTGAAATGA 897 0.5195 MANPVVARFSEFYGKWTGKLEDILHQLLQVSNQRTEVVKTNQELQALVSIVTSHLKEYYTTKWAAARDNVLIFFSPPWLNPFEHSQLWMTGWKPSIVFRQVETLKKGKVLVMTEDQEKKTEELKMRMRMEEEKVEREMERQQVAMADRKIVGLAKLTSRARSDGGGGDGTDAAAEDALKEVLAGLERVMKGSDCVRLKTLKGVLDLLSPMQSVDFLAAHIAAQLRVMQWGKQNKDEAGTVLKVNQAKKEKSTAAQHLLKVSHGSVVIHRTVVLSGIVISAVNRHERGVEGRGIVCVVK* 299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g01358 298 Coils Coil 113 149 - -
Lapu6g01358 298 Pfam Seed dormancy control 25 102 IPR025422 GO:0006351|GO:0043565
Lapu6g01358 298 PANTHER DOG1 DOMAIN-CONTAINING PROTEIN 8 240 - -
Lapu6g01358 298 ProSiteProfiles DOG1 domain profile. 6 236 IPR025422 GO:0006351|GO:0043565
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu6g01358 9 219 bZIP Transcription Factor Family AT5G06960 25.472 2.82e-08 52.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g01358 - - pvu:PHAVU_006G175000g 350.517
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu6g01358 6 13356118 13357435 Lapu6g01358 6 13356118 13357435 ECH