Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g01357 ATGGAAAATTCAGGACTGGCTTTGTTAGCATTCCAAGCGAGAATAACTTTCGATCCCTTTAATGCTTTGGTGAATTGGAATCCCAATGATTGTGACCCTTGCAAGTGGTTGGGTGTTCATTGTGTAGATGGTAAAGTGCAAATGTTTGTATTATGCAAGAATAACTTTTCTGGTGCCGTTCCCAAAGAACTTGGAGATTTACCCAAGCTAGAGTTATTAGATTTAAGGGAAAATAATTTGTCAGGAAACATCCCAGCAGAAATTGGCAACATGTCGTTATTAAAACACTTTGTGTGGCAACGTAACTTCAACCAATGGTACAAGTCAGATTCATTGGTTATTCTAACCAAAGCTACACTTACGAAATGTGCCAATACCTTTGCTTGGCCACTTTTCAAGCTAGGAAAGACTACCTCTCATGGCCGCAAAGAGGATTATTGTGACATTCTGCCAAGTTCTAATGTGCCAAAGATAGCCCAAAATGTACCAGAGCTTGTTAGTTCTGTACGTCGGAAGTTACTTCAGTCTAGTGGTAATAACCTTGCAGCTACACCTTTCAGTGACAAACCAACAATAGAGTTTAGTACTGCTCCAACTACCTTTAGTAGTGGAGCTTTTCCTGCTGTCCCAGATGCCAATAAGAAACAAAATCAGTTACCTGCATCCTTAGATTCGCCTCCTGGTGCTCCGGATGATGCTTCTGATGAAAATCAATCAAACGATGCTTCCGATGGAAATCAAACAAGTCAACAACATCTAAATAATGGTGCTTCTGGAAAAATGTGGAAGTGGGTCCCCAAGTTGAATAGAGCAGAATTAGACACAGCCTGTGAGGATTTTAGCAATATTGTTGTTAATGGTTATTACGGGTGCACCATCTACAAAGGAACATTGTCTAATGGAGTTGAGATTGCTGTAGTTTCTACTCAAATTACTTCTTCTAAAAACTGGTCAAAGAGCATGGAGATGAAATACCGCAAAAAGATTGATACTCTGTCTCGCATAAATCATAAGAACTTTATTAATCTTATTGGGTACTGCGAAGAGGAAGAACCATTCACTAGGATGTTGGTGTTTGAGTATGCTCCAAATGGAAACTTATTTGAGCATTTACATGTTGAGGACATGGAACATCTTGATTGGAGTGAAAGGATAAGGATTATCATGGGTGTTGCGTATTGTCTTCAATACATGCACCATGACTTAAATCCACCCGTGGGTCAAAGCAAGCTTGTTTCAGATATGATATTTTTAACAGATGATTTTGCTGCTAAGATTGCAGAAGTTACTTTTCAACAAATTGTGTCACCAGATGAGACAGTAGGTGATTCAAAGAAATCTGATGTATCATCCGAAGATGATCTTGCAACCAATATTTATGACTTTGGAGAGTTATTACTTGAAATCATCTCAGGGAAATTACTTTACTCGGAAGAACATGGCGACCTTGTGAAATGGGCTTCCAAGTACTTAAAAGACAAAACAAGCTTCAAAGACTTGATCGATCCCACCCTCCAATCTTTCAAGGATAACGATCTTAATACCATTTGTGAGGTGATCCAAGATTGTATCCAACCTGATCCAAAGTTAAGACCAACAATGAGGGACGTCACTTCCAAATTAAGGGAAGTGCTTGGTGTGTCCCCTGAGCAAGCAGTCCCAAGACTTTCTCCACTCTGGTGGGCTGAATTGGAGATCTTGTCAGTAGAGGCGACTTAA 1719 0.3973 MENSGLALLAFQARITFDPFNALVNWNPNDCDPCKWLGVHCVDGKVQMFVLCKNNFSGAVPKELGDLPKLELLDLRENNLSGNIPAEIGNMSLLKHFVWQRNFNQWYKSDSLVILTKATLTKCANTFAWPLFKLGKTTSHGRKEDYCDILPSSNVPKIAQNVPELVSSVRRKLLQSSGNNLAATPFSDKPTIEFSTAPTTFSSGAFPAVPDANKKQNQLPASLDSPPGAPDDASDENQSNDASDGNQTSQQHLNNGASGKMWKWVPKLNRAELDTACEDFSNIVVNGYYGCTIYKGTLSNGVEIAVVSTQITSSKNWSKSMEMKYRKKIDTLSRINHKNFINLIGYCEEEEPFTRMLVFEYAPNGNLFEHLHVEDMEHLDWSERIRIIMGVAYCLQYMHHDLNPPVGQSKLVSDMIFLTDDFAAKIAEVTFQQIVSPDETVGDSKKSDVSSEDDLATNIYDFGELLLEIISGKLLYSEEHGDLVKWASKYLKDKTSFKDLIDPTLQSFKDNDLNTICEVIQDCIQPDPKLRPTMRDVTSKLREVLGVSPEQAVPRLSPLWWAELEILSVEAT* 573
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g01357 572 PANTHER PROTEIN MALE DISCOVERER 2 258 570 - -
Lapu6g01357 572 FunFam Inactive receptor-like serine/threonine-protein kinase 254 361 - -
Lapu6g01357 572 SUPERFAMILY L domain-like 9 105 - -
Lapu6g01357 572 Gene3D Phosphorylase Kinase; domain 1 240 361 - -
Lapu6g01357 572 ProSiteProfiles Protein kinase domain profile. 247 545 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu6g01357 572 MobiDBLite consensus disorder prediction 205 256 - -
Lapu6g01357 572 Gene3D Ribonuclease Inhibitor 5 112 IPR032675 -
Lapu6g01357 572 Gene3D Transferase(Phosphotransferase) domain 1 362 552 - -
Lapu6g01357 572 Pfam Leucine rich repeat N-terminal domain 4 41 IPR013210 -
Lapu6g01357 572 SUPERFAMILY Protein kinase-like (PK-like) 275 541 IPR011009 -
Lapu6g01357 572 MobiDBLite consensus disorder prediction 232 256 - -
Lapu6g01357 572 Pfam Protein tyrosine and serine/threonine kinase 286 541 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g01357 Lapu-Chr6 13349295 13353770 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu6g01357 54 541 Receptor kinase-like Gene Family AT5G49660 28.544 6.64e-36 142
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-2 Lapu6g01357 PK_Tyr_Ser-Thr 3.5e-15 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g01357 - - vun:114189247 882.863
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu6g01357 6 13349295 13353770 Lapu6g01357 6 13349295 13353770 ECH