Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g01355 ATGTCAGAAGGACATGAGATTCATAACAATGAGGAAACTTCATCGGGATGTTCCCAGAAATGCTCTTCATTTGACTTGAATGCAGAAGCTTGCAGTGACGACAACGCTAACAGTTATATAGAAGAGGGGTATGAGCTCACAACTAGCGAGAATAATATTGAGAAGGTAAAGGATGAGGGAACTGCAGAAAATGGAAGCAGCATTTCAAGACAAGGCAATGAGAGAAGAGGAACGGTGAGACAATATCTTAGATCCAAGACGCCTCGGCTTCGGTGGACTCCTGAACTTCATCATTCATTTGTGCATGCTGTGGAAAGACTTGGTGGTCAAGAGAGAGCAACACCCAAGTTGGTGCTTCAACTAATGAACGTGCAAGGACTCAGCATTGCTCATGTCAAGAGCCACTTGCAGATGTATCGGAGCAAGAAACTTGACGAGGTTGGGCAAGTACTAAGTCAAACGTACAGGTCGAACGACCTAGGATTACGTAGATCTGTGATACTCCATCAGTCCATGAGTCCTCAGCAACATCTTATGATGGGGAATGGTGGAATCATTCTCGCAACTCATTTCAACAAACATAGTCATTTCCCAACTCTCATGCAGACCCCCTTCCCCCCATCACGTTCCCATACAAATGACATCGATTCAAGGCACCAGCAATGGTACATCAATCATCAATCTTTTAGAAAACCGATAGTTTCGGGCCAAATTCAACCAAAGGATACACCTACGAGACCAAGCCAATTGTTTGAAGAGAAAAGGTGGCTTCCCTTAGAAATTATAAACAATCATCAAGCCGATTTCCCAAAGTTACCTGCCACTGTTGTTCCTAAGAATGCATCACAAGCTGTTCAGCCCGCTGAATGGAGCTTTGTGAACAACACAAGCGTCACAGAATATCTATCTGACAAATCCAATGAACATCGCAATTATGCCAGCAGTTTAAAACTAGAATTTGATCCCCCATTTCGGATTAAGAAAAATGAGCAACAAGTGCCTGATTTGCAATTGGGTTTGAGTTACACAGTTGGAAGCGATGGTGGCAAGATGGATCATTACAAAGAAACCCAAGAAATCAGCACTAAGCTTTCACTTTCTTAA 1104 0.4303 MSEGHEIHNNEETSSGCSQKCSSFDLNAEACSDDNANSYIEEGYELTTSENNIEKVKDEGTAENGSSISRQGNERRGTVRQYLRSKTPRLRWTPELHHSFVHAVERLGGQERATPKLVLQLMNVQGLSIAHVKSHLQMYRSKKLDEVGQVLSQTYRSNDLGLRRSVILHQSMSPQQHLMMGNGGIILATHFNKHSHFPTLMQTPFPPSRSHTNDIDSRHQQWYINHQSFRKPIVSGQIQPKDTPTRPSQLFEEKRWLPLEIINNHQADFPKLPATVVPKNASQAVQPAEWSFVNNTSVTEYLSDKSNEHRNYASSLKLEFDPPFRIKKNEQQVPDLQLGLSYTVGSDGGKMDHYKETQEISTKLSLS* 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g01355 367 MobiDBLite consensus disorder prediction 347 367 - -
Lapu6g01355 367 FunFam Myb family transcription factor 86 144 - -
Lapu6g01355 367 Gene3D - 87 145 - -
Lapu6g01355 367 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 84 144 IPR017930 -
Lapu6g01355 367 Pfam Myb-like DNA-binding domain 90 140 IPR001005 -
Lapu6g01355 367 MobiDBLite consensus disorder prediction 62 78 - -
Lapu6g01355 367 MobiDBLite consensus disorder prediction 50 82 - -
Lapu6g01355 367 SUPERFAMILY Homeodomain-like 85 142 IPR009057 -
Lapu6g01355 367 NCBIfam myb-like DNA-binding domain, SHAQKYF class 88 143 IPR006447 GO:0003677
Lapu6g01355 367 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 69 192 IPR046955 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g01355 Lapu-Chr6 13325663 13328182 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu6g01355 79 145 G2-like Transcription Factor Family AT2G42660 79.104 1.44e-31 118
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Lapu6g01355 Myb_DNA-binding 1.7e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g01355 - - vun:114187451 595.119