Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g01322 ATGGAAAGGATAAAAACCTGGGAGCGCACCATCATAATCCCTTCTCACCCTCCCTTCCTTCAGGATCACTCCCTCCCTCTCTCCCACCTCGACACCGACCCCAACCTGCACCTCACCTTCCGTTACCTCCGCGCCTACACTTCAACCGCTGCAACAACCTCCCTCGACCCAGTCCACGTCATCTCCTCCTCCCTCTCCCGCGCTCTCCCCCAATTCTACCCCCTCGCCGCCACGCTCCGCCGCCGCCCAACCTCCCCCCATCGCCTCGAACTATGGTGTGCCGCTGGCCAGGGTGTCCCCCTCGTCCGCGCCGCCGCCGACTTCACCCTCCACTCCGTCAGCCACCTCGACGACCCGGCCTCGCCTCTCGCGGAGCAGTTGGTTCCCGATCCGGGTCCCGAGGAGGGGCTGGAGCACCCATGCATACTCCAGGTGACAGTTTTCGCGTGCGGCGGGTTCGTACTCGGCGCCGCCATGCACCATGCGCTGTGCGACGGCATGGGCGGCACGCTGTTCTTCAACGCCGTTGCTGAGCTGGCGCGTGGGGCTACGCGGATGACGGTGGAGGCGGTGTGGGAGCGTGACAGGTTGTTGGGTCCCCGGGAGCCGCCAAGAGTGGATTCAGCGTTGATCGGTGAGTTTCTGCGTTTGGAAAAAGGGGTTTTGCCGTACAAAGAGGGAGTTGGTGGGGTTGCGAGAGAGTGCTTTCACGTGAAGGACGAGTGCTTGAACATGCTGAAGACATTCTTGTTGGAGAAATCTGGGTTGAAATTCACAGTTTTTGAGGCCCTTGGTGCCTACATTTGGAGAGCCAAGGTGAGGGCCTGTGGAATTGAGGGTGATGAGAAGGTGAAGTTTGCATACTCAAATAACATACGGAGAGTGATAAAGCCAGCACTGCCTGGTGGGTATTGGGGCAATGGTTGTGTGCCAATGTACGTAGTGATGAGTGCTAAGGAGCTGATAGAGAAACCCATTTGGGAAACTGCAGAGCTAATAAAAAGGAGTAAAAGCAATGTGAGTGATGAGTATGTGCGGTGCTACATTGATTATCAGGAGCTGCATTTTGGCGATGGGATCACAGCCGGAAGAGAGGTGAGTGGGTTCACTGATTGGAGGCATTTGGGGCATTCAAGTGTGGACTTTGGGTGGGGAGGCCCAGTTACTGTTTTGCCCCTTGGGAGGAACCTGCTTGGGAGTGTTGAGCCTTGCTTCTTTCTGCCTTATTCCACTGCCTCTGCTCAGAACAAGAATCAGGGCTTCAAGGTTTTGGTCACTTTGAGACACTCTGCATTGCCTTCTTTCAGACAAGCCATGCAAGTGTTTTCCAGTACTCAAGACCACTGGCCAAGTCACATATAG 1362 0.5624 MERIKTWERTIIIPSHPPFLQDHSLPLSHLDTDPNLHLTFRYLRAYTSTAATTSLDPVHVISSSLSRALPQFYPLAATLRRRPTSPHRLELWCAAGQGVPLVRAAADFTLHSVSHLDDPASPLAEQLVPDPGPEEGLEHPCILQVTVFACGGFVLGAAMHHALCDGMGGTLFFNAVAELARGATRMTVEAVWERDRLLGPREPPRVDSALIGEFLRLEKGVLPYKEGVGGVARECFHVKDECLNMLKTFLLEKSGLKFTVFEALGAYIWRAKVRACGIEGDEKVKFAYSNNIRRVIKPALPGGYWGNGCVPMYVVMSAKELIEKPIWETAELIKRSKSNVSDEYVRCYIDYQELHFGDGITAGREVSGFTDWRHLGHSSVDFGWGGPVTVLPLGRNLLGSVEPCFFLPYSTASAQNKNQGFKVLVTLRHSALPSFRQAMQVFSSTQDHWPSHI* 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g01322 453 PANTHER ACYL TRANSFERASE 4 10 442 - -
Lapu6g01322 453 Gene3D - 2 211 IPR023213 -
Lapu6g01322 453 Gene3D - 229 440 IPR023213 -
Lapu6g01322 453 Pfam Transferase family 4 439 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g01322 Lapu-Chr6 13042222 13044290 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu6g01322 34 394 Monolignol Biosynthesis Gene Families AT5G48930 30.214 9.35e-36 135
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g01322 - - vra:106774544 847.425
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu6g01322 6 13042222 13044290 Lapu6g01322 6 13042222 13044290 ECH