Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g01305 ATGGACCAAAAACATAAAGTGATTCTTCTTCTGCTGCTTCTTTTCCAAGTTCTGCTAGTAGCATCACAGACAGACAGTGGAGATTATTCTGCCCTAAATTCCCTTACACAATCCTGGAGTAACAAGCCACAAAGTTGGGTGGGTCCAGATCCTTGCGGTGGCTGGGATGGAATTCGCTGCAGCAATACAAGAATTACCCAATTGAGACTTCCAGGCTTGAATTTGAGGGGCGAACTGTCTTCAGCAATTGAGTCTTTATCTGAACTAGATACTCTGGATCTTTCTTACAACACGGGTTTGGCAGGAACAATTCCAGAAGAAATTGGGAATATGAAAAAGCTTAAATCCCTATCATTGGTTGGTTGCGGTTTCTCTGGTCCAATTCCGGATTCAATGGGAGCTTTAACGCAGCTGACCTTTCTAGCATTGAATTCTAACAAGTTCAGTGGAACAATACCACGATCTCTTGGCAATCTATCAAATATCAATTGGCTTGATCTTGCTGAAAACGAGCTTGAAGGGACTATTCCTGTCTCTGATGACGAAGGGCGACCAGGCCTTGACCTTCTCCATAAGGCACAACACTTTCATATGGGGAGCAATAAACTCTCTGGTACAATACCAGAAAAACTTTTTAGCTCCAGTATGATTCTAGAACACGTGCTTTTTGACCACAATCAACTAGAGGGTAGTGTTCCTGGATCCATTAGTTCTGTGGGGACATTGGAAGTTCTGCGCTTAGACAAGAATGGATTAACAGGGGGAGTGCCGGCAAACTTAACCAAACTCGGAAAACTAAGTGAGATCTATTTATCTCACAATAAGCTGAATGGCACTCTGCCCGATTTAACTGGGATGAATAGTCTCACTTACGTGGACATGAGCGACAATGCTTTCAATGCCTCTGATATTCCTTCATGGGTTACAAGTCTAACAGGATTGACAACAGTGATACTTGAGAAGAACCAGCTCGGTGGCGCACTAAATCTTAGTGGCTACAGCAAAAGTCTGCAACTCATAAATTTGGAGAGTAATGAAATAACAGAGATTGACCCAGAAAACAATCTACCAAGTTTTGAAATAAGACTAGCTAACAACCCAATATGTCGTGAAAGTGGCGCTTCTGAAAAGAGTTACTGCAAAGAACCAGTACCCAATCCCTCATTTTATTCAACACCGTCAAATAATTGTTCTCGTCCACCTTGCAGTTCCGATCAGATTCCCAGCCCAAATTGTAAATGTGCATTTCCCTATACAGGACTTCTTATATCGAGAGCTCTTAGTTTCTCAAACTTCAGTGACGCAAGTTACTATAGGGAGCTTGAGCAGTCTCTGATGGATACTTTCCGAAACCAAAGCACTCCAGTGGATTCAGTTTCTCTTAGTAACCCCATGAGAAATTCTACTTCAGATAACTTTGAATTGACTCTGGAAGTCTTCCCTTCGCAAAGCGATCGTTTCAATACAACTGGAGTTTTAACTATTGCTTTTCTGCTTAGCAACCAAATTTACAAACCCCCAGAGTTCTTCTCCCCTTACATCTTCAAGGGTGCTAATTATGAATACACCGGAGGAGAATCAAAAGGATCAAAGTCGTCTCATACTGGGATTATAGTTGGTGCTGTAGTTGCTGTTGTGGTCTTTGTTGTACTAGCATCCCTTGCAGGGATGTATGCCATTCGCCAGAAAAGAAGAGCAGAAAGATCTGCAGGCTTGAACCCTTTTGCAAATTGGGAACAGAATAAGAATAGTGGTACTGCTCCTCAGTTGAAAGGAGGACGATGGTTTGCTTTTGATGACCTAAGGAAATACACCAACAACTTCTCAGAAGCCAATACTATTGGATCTGGAGGCTATGGACAGGTTTACCAAGGAACTCTTCCCTCTGGGGAGTTGGTTGCTATTAAACGGGCTGCAAAAGAATCTATGCAGGGTGCTGTTGAGTTTAAAACTGAGATTGAACTTCTATCAAGGGTCCATCATAAGAATCTCGTTAGTCTTGTGGGTTTCTGTTTTGAGAAGGGTGAACAAATGCTGGTGTATGAGTACATTCCAAATGGCACTTTAATGGATAGTCTCTCAGGAAAGTCTGGGATCTGGATGGATTGGATAAGGAGGCTAAAAGTAGCATTAGGTGCAGCCAGGGGTCTGGCCTATCTTCATGAACTTGCTAACCCACCAATCATACACAGGGACATCAAATCTAGCAACATCTTACTTGATCATCACCTCAACTCAAAAGTTGCTGATTTCGGTCTCTCCAAACTTCTTGTTGATAGTGAAAGGGGCCATGTCACTACTCAAGTCAAAGGAACAATGGGATACTTGGATCCTGAATATTACATGACCCAGCAGTTAACCGAAAAGAGTGATGTATATAGCTTTGGAGTGCTAATGCTGGAACTAGCAACAGCAAGAAGGCCAATAGAACAAGGAAAGTATATTGTAAGAGAGGTAATGAGGGTAATGGACACGTCAAAAGATTTATACAACCTTCACTCCATTCTAGATCCAACCATTATGAAAACAAGACCAAAAGGCTTAGAAAAGTTTGTGATGTTGGCTATGAGGTGTGTCAAAGAATATGCAGCTGAGAGGCCTACAATGGCTGAGGTCGTAAAAGAGATTGAGAGCATAATCGAGCTCGTTGGATTGAACCCCAATTCTGAATCAGCTACAACATCAGAAACTTATGAGGAAGCAGGTGCAGGAAATGCCCAACATCCTTACAGGGAAGAAGATTTTAGCTATAGTGGAATGTTTCCATCAACAAGGGTAGAACCCCAATAG 2790 0.4222 MDQKHKVILLLLLLFQVLLVASQTDSGDYSALNSLTQSWSNKPQSWVGPDPCGGWDGIRCSNTRITQLRLPGLNLRGELSSAIESLSELDTLDLSYNTGLAGTIPEEIGNMKKLKSLSLVGCGFSGPIPDSMGALTQLTFLALNSNKFSGTIPRSLGNLSNINWLDLAENELEGTIPVSDDEGRPGLDLLHKAQHFHMGSNKLSGTIPEKLFSSSMILEHVLFDHNQLEGSVPGSISSVGTLEVLRLDKNGLTGGVPANLTKLGKLSEIYLSHNKLNGTLPDLTGMNSLTYVDMSDNAFNASDIPSWVTSLTGLTTVILEKNQLGGALNLSGYSKSLQLINLESNEITEIDPENNLPSFEIRLANNPICRESGASEKSYCKEPVPNPSFYSTPSNNCSRPPCSSDQIPSPNCKCAFPYTGLLISRALSFSNFSDASYYRELEQSLMDTFRNQSTPVDSVSLSNPMRNSTSDNFELTLEVFPSQSDRFNTTGVLTIAFLLSNQIYKPPEFFSPYIFKGANYEYTGGESKGSKSSHTGIIVGAVVAVVVFVVLASLAGMYAIRQKRRAERSAGLNPFANWEQNKNSGTAPQLKGGRWFAFDDLRKYTNNFSEANTIGSGGYGQVYQGTLPSGELVAIKRAAKESMQGAVEFKTEIELLSRVHHKNLVSLVGFCFEKGEQMLVYEYIPNGTLMDSLSGKSGIWMDWIRRLKVALGAARGLAYLHELANPPIIHRDIKSSNILLDHHLNSKVADFGLSKLLVDSERGHVTTQVKGTMGYLDPEYYMTQQLTEKSDVYSFGVLMLELATARRPIEQGKYIVREVMRVMDTSKDLYNLHSILDPTIMKTRPKGLEKFVMLAMRCVKEYAAERPTMAEVVKEIESIIELVGLNPNSESATTSETYEEAGAGNAQHPYREEDFSYSGMFPSTRVEPQ* 930
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g01305 929 Gene3D Ribonuclease Inhibitor 24 182 IPR032675 -
Lapu6g01305 929 Gene3D Transferase(Phosphotransferase) domain 1 684 897 - -
Lapu6g01305 929 FunFam Leucine-rich repeat protein kinase family protein 575 683 - -
Lapu6g01305 929 SUPERFAMILY L domain-like 59 370 - -
Lapu6g01305 929 ProSiteProfiles Protein kinase domain profile. 608 880 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu6g01305 929 CDD STKc_IRAK 614 879 - -
Lapu6g01305 929 Gene3D Phosphorylase Kinase; domain 1 578 683 - -
Lapu6g01305 929 ProSitePatterns Serine/Threonine protein kinases active-site signature. 728 740 IPR008271 GO:0004672|GO:0006468
Lapu6g01305 929 FunFam Leucine-rich repeat family protein 27 181 - -
Lapu6g01305 929 Pfam Protein kinase domain 609 874 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu6g01305 929 MobiDBLite consensus disorder prediction 890 909 - -
Lapu6g01305 929 FunFam LRR receptor-like serine/threonine-protein kinase HSL2 684 892 - -
Lapu6g01305 929 SMART serkin_6 608 880 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu6g01305 929 Gene3D Ribonuclease Inhibitor 282 383 IPR032675 -
Lapu6g01305 929 ProSiteProfiles Leucine-rich repeat profile. 336 357 IPR001611 GO:0005515
Lapu6g01305 929 PANTHER RECEPTOR-LIKE PROTEIN 55 34 879 - -
Lapu6g01305 929 ProSitePatterns Protein kinases ATP-binding region signature. 614 640 IPR017441 GO:0005524
Lapu6g01305 929 SUPERFAMILY Protein kinase-like (PK-like) 594 888 IPR011009 -
Lapu6g01305 929 Gene3D Ribonuclease Inhibitor 183 281 IPR032675 -
Lapu6g01305 929 FunFam Leucine-rich repeat protein kinase family protein 183 282 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g01305 Lapu-Chr6 12889182 12896785 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu6g01305 8 929 Receptor kinase-like Gene Family AT5G49760 52.892 0.0 940
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VIII-1 Lapu6g01305 Pkinase 1.6e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g01305 - - gmx:100786172 1614.74