Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g01301 ATGGGAAAAAGAAAGGCAAAGGCAAAGCCTGCTCCAAAGAAACGAATGGATAAGCTTGATACTGTCTTCAGCTGCCCTTTCTGCAATCATGGCAGCAGTGTTGAATGCCGCATTGATATGAAGAACTTGATTGGGGAAGCTACTTGTGGGATATGCCAAGAGAGCTTTAGCACTACCATCACAGGTTTGTATCAATAG 198 0.4394 MGKRKAKAKPAPKKRMDKLDTVFSCPFCNHGSSVECRIDMKNLIGEATCGICQESFSTTITGLYQ* 66
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g01301 65 Pfam Transcription elongation factor Elf1 like 2 64 IPR007808 -
Lapu6g01301 65 SUPERFAMILY Zinc beta-ribbon 1 64 - -
Lapu6g01301 65 PANTHER UNCHARACTERIZED 1 63 IPR007808 -
Lapu6g01301 65 Gene3D - 16 65 IPR038567 -
Lapu6g01301 65 FunFam Transcription elongation factor 1 homolog 15 65 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Lapu6g01301 Elf1 1e-20 CL0167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g01301 K25829 - lja:Lj6g3v2006410.1 118.627
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu6g01301 6 12862923 12863299 Lapu6g01301 6 12862923 12863299 ECH