Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g01300 ATGAAGAAAATTTCCAAGAGCAGCTGCAAATCGGCATCACACAGGCTCTTTAAAGACAAGGCAAGAAACCATGTTGATGATCTACAGGTCATGTTCTTGGATCTGCAGTTTGCCAGAAAGGAGAGCCGCACGATTGATGTGGCACTCCTTGAAGAGCAAGTCCATCAAATGCTTCGTGAGTGGAAGGCTGAGCTCAATGAACCTTCTCCAGCTTCTTCTCTACAGCAAGGTGGTAGTCTCGGTTCATTCTCGACCGATGTCTATAGGCTATTGCAGCTATGTGAGGAGGAGGATGATGCGACTAGTTCATTAGTTGCACCTAAGCCTGAACCTAATGATCAGACTATGCAGGCTGGGGCTAAGGTGATAGTCCAAGAGGGCCAACAAGAACAAGACTTCCTATTGCTTAGAGAATGCAAACAATTCGCTGCAGGAGTTCCCAACATGGCAGCTAACAACTTGGATGGACCTGCTTTAGAATTTCATCAATTTGAATTCAATAAGGACTTGGATCACAGCTTTTATGCTGGTACAGGATTTTGTGAGGAAGGTGGTGTTCCTCATATATCTAGCTATCTTCCGAGTGTGTGTCCTCCTCCTTCTGCTTTCTTAGGTCCAAAATGCGCACTTTGGGACTGTCCAAGACCGGTTCAAGGGTTGGATTGGTGTCAAGATTATTGCAGTAGCTTTCATGCTGCTCTTGCTTTAAATGAAGGACCACCAGGTATGACCCCAGTTCTAAGACCTGGGGGAATTGGACTCAAGGATAATTTACTTTTTGCTGCTCTTAGTGCAAAGGCACAAGGAAAAGTTGTTGGCATTCCCGAATGTGAGGGAGCAGCAACTGCAAAATCTCCATGGAATGCACCTGAACTCTTTGATATTTGTGTTCTGGAGGGTGAGACTATTAGGGAGTGGCTTTTCTTTGATAAGCCTAGAAGGGCATTTGAGAGTGGGAACAGAAAGCAGAGGTCACTGCCGGATTATAGCGGACGTGGATGGCATGAATCTAGAAAGCAAGTGATGAATGAGTTTGGAGGGCTGAAGAGATCCTATTACATGGACCCTCAACCTCTGAACCTTTTTGAGTGGCACCTTTATGAGTATGAAATTAGCAAGTGTGATGCATGTGCCTTGTATCGGTTAGAACTAAAGCTTGTTGATGGGAAGAAGAGCTCCAAGGCAAAGATAATAACGGGTGATTCGGTTGCTGATCTGCAGAAGCACATGGGAAGCCTCTCTGCTGAGTTTCACTCTGATAGTAACAAACGATCTGCCAAAGCTAGAACCAAGCTTGGCATAGGAGGTGGTGTTTATTCAGCTTCTAACAGAGTTGCTCTACTAAATGCACCTTATCAATACGGCTTAACTGCACCATATGACTTTGTTGTTGACAACACAAGTGACTATATGAACAACAAGACAAGGTGGTTTTTTTTCCTTGTCAAGACATTGTGA 1458 0.4458 MKKISKSSCKSASHRLFKDKARNHVDDLQVMFLDLQFARKESRTIDVALLEEQVHQMLREWKAELNEPSPASSLQQGGSLGSFSTDVYRLLQLCEEEDDATSSLVAPKPEPNDQTMQAGAKVIVQEGQQEQDFLLLRECKQFAAGVPNMAANNLDGPALEFHQFEFNKDLDHSFYAGTGFCEEGGVPHISSYLPSVCPPPSAFLGPKCALWDCPRPVQGLDWCQDYCSSFHAALALNEGPPGMTPVLRPGGIGLKDNLLFAALSAKAQGKVVGIPECEGAATAKSPWNAPELFDICVLEGETIREWLFFDKPRRAFESGNRKQRSLPDYSGRGWHESRKQVMNEFGGLKRSYYMDPQPLNLFEWHLYEYEISKCDACALYRLELKLVDGKKSSKAKIITGDSVADLQKHMGSLSAEFHSDSNKRSAKARTKLGIGGGVYSASNRVALLNAPYQYGLTAPYDFVVDNTSDYMNNKTRWFFFLVKTL* 486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g01300 485 PANTHER TRANSCRIPTION FACTOR VOZ1 1 468 IPR039277 GO:0006355|GO:0048578
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g01300 Lapu-Chr6 12854893 12858902 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu6g01300 3 470 VOZ-9 Transcription Factor Family AT1G28520 66.803 0.0 644
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF VOZ Lapu6g01300 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g01300 - - gmx:100784593 848.58