Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g01298 ATGGAAAAGATGGATGCTGAAGAGTTGTTTGAGGCTCAGGCTCATTTATACAACTATACTTATAGTTTCATTGGTTCCATGTGCCTCAAAAGTGCAGTTCACTTGGGAATTCCAGACATAATTTTCAAGAATGGCCAACCTATTACTCTCTCTGAGTTGGTGTTGGCACTTCAGATTCAACCTACAAAATCTGATCATGTATACAGGCTCATGCGCTTGCTGGTGCATGCTGGCTTCTTTGCCACAACCAAGGTTGTGAAAGAAGATAAGGAAGAAGTGGGGTATGATCTCACGCCTTCCTCGAGGCTACTCCTTAAGGACAATGTTCCAACCTTGTCTCCTTTTGTTCGAGCAATGTTTCATCCGGCTCTAGTTCACTCATCGGAATCCTTGGCTGAGTGGTTTCACAGAAATGAGATCACACCCTTTGACAGTGCGTTTGGCATGAGTTATTGGGACTATTTGAGTCAAAACCAAGAGTTTAACGGCCTCTTCAATGAAGCAATGATCAGTGATTCCGGGATGGTGAATTTGGTTATCAAAAACTGTAAATCTGTTTTTGAGGGACTGAATTCTTTGGTCGATGTCGGTGGTGGTAAAGGGGGTGTAGGTAGAATAGTTTGTGAGTCACTGCCTAATTTGCATTGGACCGTGCTTGATCTTCCACATGTGGTTGAAAATATTCCTGACAGTGCCAATTTGAAGTTTGTTGGAGGTGACATGTTTCAGTCTATTCCTTCAGCAGATGCCATTCTTCTTAAGTTAGTGTTGCATGCTTATAGTGATGAAGAGTGCATTAAGGTACTGAAGAATTGCAAAGAAGCTATTTCAAAGAAAGGGAAGGCAGGGAAAGTAATTATCATAGACATAGTGGTTGGTGAAAAGAATGAAAACCATGTATTGACAGAAGCAAAGTTGTTTTTTGATATGTTAATGATGGTTCTGGTCACTGGAAAAGAGAGGGAAGAAAAAGAATGGGAGAAACTCTTCTTGGAAGCTGGATTCAGTCATTACAAGATAACACCCATCTTTGGTATGAGATCGCTTATTGAAGTTTATCCTTGA 1065 0.4094 MEKMDAEELFEAQAHLYNYTYSFIGSMCLKSAVHLGIPDIIFKNGQPITLSELVLALQIQPTKSDHVYRLMRLLVHAGFFATTKVVKEDKEEVGYDLTPSSRLLLKDNVPTLSPFVRAMFHPALVHSSESLAEWFHRNEITPFDSAFGMSYWDYLSQNQEFNGLFNEAMISDSGMVNLVIKNCKSVFEGLNSLVDVGGGKGGVGRIVCESLPNLHWTVLDLPHVVENIPDSANLKFVGGDMFQSIPSADAILLKLVLHAYSDEECIKVLKNCKEAISKKGKAGKVIIIDIVVGEKNENHVLTEAKLFFDMLMMVLVTGKEREEKEWEKLFLEAGFSHYKITPIFGMRSLIEVYP* 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g01298 354 PIRSF O-mtase 1 354 IPR016461 GO:0008168
Lapu6g01298 354 FunFam O-methyltransferase ZRP4 106 354 - -
Lapu6g01298 354 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 17 354 IPR016461 GO:0008168
Lapu6g01298 354 Gene3D - 1 104 IPR036388 -
Lapu6g01298 354 Gene3D Vaccinia Virus protein VP39 105 354 IPR029063 -
Lapu6g01298 354 Pfam O-methyltransferase domain 131 336 IPR001077 GO:0008171
Lapu6g01298 354 Pfam Dimerisation domain 27 75 IPR012967 GO:0046983
Lapu6g01298 354 PANTHER O-METHYLTRANSFERASE 8 339 IPR016461 GO:0008168
Lapu6g01298 354 SUPERFAMILY "Winged helix" DNA-binding domain 7 108 IPR036390 -
Lapu6g01298 354 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 111 353 IPR029063 -
Lapu6g01298 354 FunFam Coniferyl alcohol 9-O-methyltransferase 1 104 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g01298 Lapu-Chr6 12844997 12846415 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu6g01298 27 352 Monolignol Biosynthesis Gene Families AT5G54160 35.119 9.66e-52 174
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g01298 K22588 - qsu:112018723 474.167