Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g01292 ATGACATGGTGCAATGACTCGGATGAAGAGAGGAGGATCGAATCAATCATGCCAACTATGACTGTTACTCAAAAGACTGATGTTACTGACATAAAACTCACTGAAGAAATTCGAACTATAACATGCCCCTCGTGCGGGCATAACATTGAATTTAAAGATCAGGGCGGAATTCACGACTTGCCGGGGTTACCAGCTGGAGTGAAATTTGACCCAAATGACCAAGAAATATTAGAGCATTTAGAGGCAAAAGTGGTGTCTGATGCATGCAAGCTTCATCCCCTTATTGATGAGTTCATACCAACTCTTGAAGGCGAGAATGGGATTTGTTCTACGCACCCAGAAAAACTACCAGGAGTTAGCAAAGATGGACAGATCCGCCACTTCTTTCACAGGCCATCAAAAGCATACACAACTGGAACAAGGAAAAGAAGAAAGGTTCACACCGATGAAGAAGGAAGTGAGACAAGATGGCACAAAACGGGAAAAACTAGAGCCGTTTCTGCAGCTGGTGGTGCAGTGAAAGGTTTTAAAAAAATACTAGTACTCTACACCAACTATGGCAGGAAAAAGAAGCCTGAGAAGACTAATTGGGTGATGCATCAATACCATCTTGGTAGCACTGAAGAAGAGAAAGATGGAGAATTAGTAGTTTCAAAGATCTTCTATCAGACACAACCCAGACAATGTGGTAATAATCCCATTATCATAAAGGACCCGTACGAAAAAATGTTGAATATTGATGGAGTTAGTGAGCACAACAACAATACATCAATACCTAAAACTGCAACTCTCGGGGATTGCTACACTGCTCCTTACATAAATTATGATAATGTCCATTTGAGTTATAATAGGGAAAGCTCCCCACAACGAATTATTCCCAACTCGGTTGTTCAAGCTGATGGCTCTTACATTCGCTATGCAATGGATGCAAAGAAAGCGAGATTTTGA 948 0.4124 MTWCNDSDEERRIESIMPTMTVTQKTDVTDIKLTEEIRTITCPSCGHNIEFKDQGGIHDLPGLPAGVKFDPNDQEILEHLEAKVVSDACKLHPLIDEFIPTLEGENGICSTHPEKLPGVSKDGQIRHFFHRPSKAYTTGTRKRRKVHTDEEGSETRWHKTGKTRAVSAAGGAVKGFKKILVLYTNYGRKKKPEKTNWVMHQYHLGSTEEEKDGELVVSKIFYQTQPRQCGNNPIIIKDPYEKMLNIDGVSEHNNNTSIPKTATLGDCYTAPYINYDNVHLSYNRESSPQRIIPNSVVQADGSYIRYAMDAKKARF* 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g01292 315 Pfam No apical meristem (NAM) protein 64 204 IPR003441 GO:0003677|GO:0006355
Lapu6g01292 315 PANTHER NAC DOMAIN-CONTAINING PROTEIN 73 21 234 IPR044799 GO:0003700
Lapu6g01292 315 SUPERFAMILY NAC domain 57 223 IPR036093 GO:0003677|GO:0006355
Lapu6g01292 315 Gene3D NAC domain 72 227 IPR036093 GO:0003677|GO:0006355
Lapu6g01292 315 ProSiteProfiles NAC domain profile. 63 223 IPR003441 GO:0003677|GO:0006355
Lapu6g01292 315 FunFam NAC domain-containing protein 73 72 227 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g01292 Lapu-Chr6 12782961 12787284 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu6g01292 1 232 NAC Transcription Factor Family AT4G28500 71.674 1.33e-121 349
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lapu6g01292 NAM 7.5e-23 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g01292 - - gmx:100809389 555.444