Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g01289 ATGTCCCTGCTTCATCTCTTCCTCTTCACCATGCTTCTGCTCCAAAAACCTTTCTTCATCTCTGCTCTCAACCAAGACGGTTTATATCTGTACCAATGGAAGCAATCCCTGGACGACCCTGACTCATCACTGGCGTCCTGGAACAACCGCGACACCACCCCATGCAATTGGGCCGGCGTCACTTGCGCCCCAAATACCACCGCCGTCACTTCACTCGACCTCTCCAACTTCAACGTCGCTGGCCCATTCTCCGCCACCTTCCTCTGCCGCCTCCCCAACCTCACCTCCATCATCCTCTTCAACAACTCCATCAACCAAACCCTCCCTCTCCTGATATCCCTCTGCACCCCCCTCCTCCACCTCGACCTCTCCCAGAACCTCCTCACCGGCACCCTCCCACACACCCTCCCCCTCCTCCCCAGCCTCCGCTACCTCGACCTCACCGGCAACAACTTCTCCGGCCCCGTTCCTCCCTCCTTCGGAACCTTCCCCAACCTCCAAACCCTTTCCCTCGTATTCAACCTCCTCGACGACGTCCTTCCGCCTTCTCTTTTCAACATCACCTCCCTCAAAACGCTCAATCTCTCCTACAACCCATTCCACCCTTCTCCAATTCCTCCCTCCCTCGGTAACCTCTCCAACCTCGAAACGCTCTGGCTCAGCGGCTGCAACCTCGTCGGCCCCATCCCCGACTCCGTCGGGAACCTCAAAAACCTTCGCGTCTTGGATTTGGCCTTCAACAACCTCTATGGACCCATCCCTAGTTCGCTCACTCGCATCACCACTCTCAAGCAGATTGAGTTGTACAACAACTCGCTCTCCGGTGAGTTGCCTAAGGGAATCTCCAACCTCACTTCCTTGAGGCTCTTTGATGTTTCCATGAACCATTTCAGTGGCCCCATTCCCGATGAGTTGTGTCGTCTGCCTCTCGAGAGTCTCAACCTCTACGAGAACGGTTTCACCGGGGAGTTGCCGGCGAGTATTGCTGACTCACCCAACCTCTATGAGCTCAGGTTGTTCGGGAACAAACTCACCGGGAAATTGCCGCACAGTTTAGGGAAGTATGCTCCTTTGAGGTGGCTTGACGTTTCCACCAACCGTTTCTCCGGTGGGATTCCGGTGAATATCTGCGAGTACGGCCAGTTGGAGGAGATGTTGATGCTCGGGAACGAGTTCTCCGGGGAGATTCCGGCGAGTCTCGGCACCTGTCGAAGCTTGACGCGTGTGAGGTTGGGTACGAACCGGTTGTCCGGGGAGGTTCCGGCGGGTATGTGGGGTCTTCCGCATGTATATTTGCTTGAACTGATGGATAACTTGTTTAGTGGCTCCATTGCAAGGAGCATTGGCGGGGCGAGGAATTTGTCGTCGTTGATTCTGACGAAGAACAATTTCTCCGGTGTGATCCCCGAGGAGATTGGGTGGTTGGAGAATCTTCAAGAGTTTTCTGGTGGTGATAACAGGCTCAGTGGGTCGTTGCCTGCGAGTATTGTGAATCTTGGGCAGCTTGGGACTCTTGATCTTCACAACAATATGCTCTCCGGGGAGCTCCCGGAGGGGATTCAATCGTGGAAGAAACTCAATGACTTGAATTTGGCTAATAATGAGATTGGTGGGAAGATTCCTGATGGAGTTGGGAGTTTGGCTGTGTTGAATTTTCTTGATCTTTCCAACAATCAATTTTCTGGTAGTGTTCCTCTGGAGTTGCAGAATTTGAAGCTCAATCAGCTCAATTTGTCATATAATAGGCTTTCTGGAAAGCTTCCCCCACTGCTGGCCAAGGATATGTACAGGGCTAGTTTTATTGGCAATCCTGGCCTGTGTGGGGATTTCAAAGGTTTGTGTGATGGCCAAGATGGAGATAAGGGTAAGGGTTTTGTGTGGATTCTGCGAGCTATTTTTGTAGTTGCCTCTTTGGTGTTTGTCATCGGTGTGGTCTGGTTTTACTTAAGGTATAGGAATTTCAAGAATGCTGAGAGATCTGTTGATAAATCAAAGTGGACTTTGATGTCGTTTCATAAACTGGGTTTCAGCGAAGATGAGATTTTGAACTGCCTCGATGAAGATAATGTGATAGGAAGTGGGTCTTCCGGGAAGGTTTACAAGGTTGTGTTGACCAGCGGGGAAGCGGTTGCTGTGAAGAAGATACGGGGTGGGGTCAGGAAGGGAATAGACAGTGGAGATGTAGAGAGGGGTCAGTTTCATCAAGACAGTGCTTTTGACGCAGAGGTTGAAACTTTGGGCAAAATTAGGCACAAGAACATAGTCAAACTGTGGTGTTGCTGCACCACTAGGGATAGCAAGCTATTGGTGTACGAGTATATGCCGAACGGTAGTCTGGGTGATTTGCTGCATAGCAATAAAGGAGGGTTGTTGGATTGGCCAACTAGGTATAAGATAACTGTTGATGCTGCAGAAGGCCTCTCTTATTTGCATCACGACTGTGTTCCTTCAATTGTTCATAGAGATGTGAAATCTAATAACATCTTGTTGGATGGGGATTTTGGTGCAAGGGTGGCAGATTTTGGAGTAGCTAAGGTAGTTGATGCCACTGGGAAAGGAACTAAATCCATGTCTGTCATAGCTGGGTCTTGTGGGTACATTGCACCAGAATATGCATACACACTCAGAGTGAATGAGAAGAGTGACATATATAGTTTTGGTGTTGTCATACTTGAGTTGGTTACTGGAAGGAGGCCCATTGACCCGGAATTTGGGGAAAAAGACTTGGTTATGTGGGCGTGCACCACCTTGGATCAGAAAGGCGTGGACCATGTGATTGACTCGAGGCTTGATTCTTGTTTCAAAGAAGAAATTTGCAAGGTGCTCAACATTGGCCTGATGTGCACTAGTCCTCTTCCAATCAACCGGCCTGCAATGAGAAGAGTGGTGAAGATGTTACAAGAGGTGGGCGCAGAGAACCTAACGAAACCAGCCAAGAAAGATGGAAAGTTGTCCCCGTATTACTATGACGATGGGTCAGATCATGGAAGTGTTGCTTAG 3000 0.4997 MSLLHLFLFTMLLLQKPFFISALNQDGLYLYQWKQSLDDPDSSLASWNNRDTTPCNWAGVTCAPNTTAVTSLDLSNFNVAGPFSATFLCRLPNLTSIILFNNSINQTLPLLISLCTPLLHLDLSQNLLTGTLPHTLPLLPSLRYLDLTGNNFSGPVPPSFGTFPNLQTLSLVFNLLDDVLPPSLFNITSLKTLNLSYNPFHPSPIPPSLGNLSNLETLWLSGCNLVGPIPDSVGNLKNLRVLDLAFNNLYGPIPSSLTRITTLKQIELYNNSLSGELPKGISNLTSLRLFDVSMNHFSGPIPDELCRLPLESLNLYENGFTGELPASIADSPNLYELRLFGNKLTGKLPHSLGKYAPLRWLDVSTNRFSGGIPVNICEYGQLEEMLMLGNEFSGEIPASLGTCRSLTRVRLGTNRLSGEVPAGMWGLPHVYLLELMDNLFSGSIARSIGGARNLSSLILTKNNFSGVIPEEIGWLENLQEFSGGDNRLSGSLPASIVNLGQLGTLDLHNNMLSGELPEGIQSWKKLNDLNLANNEIGGKIPDGVGSLAVLNFLDLSNNQFSGSVPLELQNLKLNQLNLSYNRLSGKLPPLLAKDMYRASFIGNPGLCGDFKGLCDGQDGDKGKGFVWILRAIFVVASLVFVIGVVWFYLRYRNFKNAERSVDKSKWTLMSFHKLGFSEDEILNCLDEDNVIGSGSSGKVYKVVLTSGEAVAVKKIRGGVRKGIDSGDVERGQFHQDSAFDAEVETLGKIRHKNIVKLWCCCTTRDSKLLVYEYMPNGSLGDLLHSNKGGLLDWPTRYKITVDAAEGLSYLHHDCVPSIVHRDVKSNNILLDGDFGARVADFGVAKVVDATGKGTKSMSVIAGSCGYIAPEYAYTLRVNEKSDIYSFGVVILELVTGRRPIDPEFGEKDLVMWACTTLDQKGVDHVIDSRLDSCFKEEICKVLNIGLMCTSPLPINRPAMRRVVKMLQEVGAENLTKPAKKDGKLSPYYYDDGSDHGSVA* 1000
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g01289 999 SUPERFAMILY Protein kinase-like (PK-like) 680 966 IPR011009 -
Lapu6g01289 999 SUPERFAMILY RNI-like 311 588 - -
Lapu6g01289 999 ProSitePatterns Serine/Threonine protein kinases active-site signature. 818 830 IPR008271 GO:0004672|GO:0006468
Lapu6g01289 999 Gene3D Ribonuclease Inhibitor 253 309 IPR032675 -
Lapu6g01289 999 SUPERFAMILY RNI-like 71 393 - -
Lapu6g01289 999 Pfam Protein kinase domain 687 903 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu6g01289 999 Pfam Leucine rich repeat 92 152 IPR001611 GO:0005515
Lapu6g01289 999 Gene3D Ribonuclease Inhibitor 310 615 IPR032675 -
Lapu6g01289 999 ProSiteProfiles Protein kinase domain profile. 685 969 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu6g01289 999 FunFam LRR receptor-like serine/threonine-protein kinase ERL1 23 187 - -
Lapu6g01289 999 Pfam Leucine rich repeat N-terminal domain 24 62 IPR013210 -
Lapu6g01289 999 Gene3D Ribonuclease Inhibitor 181 252 IPR032675 -
Lapu6g01289 999 FunFam Leucine-rich receptor-like protein kinase family protein 205 303 - -
Lapu6g01289 999 Gene3D Ribonuclease Inhibitor 22 180 IPR032675 -
Lapu6g01289 999 FunFam Receptor-like protein kinase HSL1 309 616 - -
Lapu6g01289 999 Gene3D Phosphorylase Kinase; domain 1 669 773 - -
Lapu6g01289 999 FunFam Receptor-like protein kinase HSL1 669 773 - -
Lapu6g01289 999 Pfam Leucine Rich Repeat 214 236 IPR001611 GO:0005515
Lapu6g01289 999 Pfam Leucine Rich Repeat 189 212 IPR001611 GO:0005515
Lapu6g01289 999 ProSitePatterns Protein kinases ATP-binding region signature. 691 714 IPR017441 GO:0005524
Lapu6g01289 999 SMART serkin_6 685 988 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu6g01289 999 Gene3D Transferase(Phosphotransferase) domain 1 774 987 - -
Lapu6g01289 999 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 261 967 - -
Lapu6g01289 999 SMART LRR_typ_2 139 162 IPR003591 -
Lapu6g01289 999 SMART LRR_typ_2 91 115 IPR003591 -
Lapu6g01289 999 SMART LRR_typ_2 163 187 IPR003591 -
Lapu6g01289 999 SMART LRR_typ_2 499 522 IPR003591 -
Lapu6g01289 999 SMART LRR_typ_2 284 308 IPR003591 -
Lapu6g01289 999 SMART LRR_typ_2 547 570 IPR003591 -
Lapu6g01289 999 SMART LRR_typ_2 236 260 IPR003591 -
Lapu6g01289 999 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase 774 983 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g01289 Lapu-Chr6 12758845 12764015 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu6g01289 20 999 Receptor kinase-like Gene Family AT1G28440 68.154 0.0 1363
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Lapu6g01289 Pkinase 6.3e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g01289 - - gmx:100776936 1757.27