Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g01287 ATGGAGGCTGAGCCAGACAACAACGAGGTGAAGAGGGAAGAAAACAGCAATGACAACAACAACAACAATGAAAGCAACAGCAAATTTGGAAATTCGAGTGAGGGTCAGAGCAAGCCCAAGCGCCAGATGAAGACGCCGTTTCAGCTTGAAACTCTCGAGAAAGCTTATGCTGTGGAGAATTACCCGTCCGAGACGATGAGGGGGGAGTTGTCTGAGAAGTTGGGGTTGTCGGATCGGCAGTTGCAGATGTGGTTCTGTCACCGGCGGTTGAAGGACAAGAAGGACTTGCCGTCGAAAAAACCTCGTAAGGCGGCGGCGTTACCTGATTCTCCGGTTGAGGAGCCCAAACTGGCTTCCGAAGTGGGTGCTGAATACGGATCCGGGTCGGGTTCAGGGTCCAGTCCGTTTACCCGTTCGGAGTTGAGGAATGTAGTGCCTCGGGGGTACTATGAGTCACCACAGACTATAATGGAGCTTAGAGCAATTGCTTGTGTGGAGGCTCAGTTGGGGGAGCCTTTGAGGGAAGATGGGCCTATTCTTGGAGTGGAGTTTGATCCGTTGCCACCGGATGCATTTGGGGCACCCTTAGCTGTTACAGATCCTCAAAAGCGACCTAGTCTTGCCTATGACAGTAAAATATATGAAAGACATGATGTTAGGACAAATAAGGCAATAGCAAGGACATTCCATGAATATCCCTTTCTTCCAAGCCAGTCTGGCATTAGATCTGATGTTTTTGGACAACTAAACCTGCCTCATTTACATGAACCAATTGAGGGTCCGGCAAGAACTCCTTTTCCCCTTGGAAGTGAACAGCAACCTAGAATTCATGCTCCCCAAAGTCATTCTTCTCGTGTTCGCCTTTTGTCTCAACCACAGGACAAGCAAGTGATTCCCTATCCATCTCCCCCTCGAGAAAATGATGTTGTACCCAAAAGGGAACCTCACATAAACATAACAAATACTGGAATGAACTCCCACTATACTGATCACCCAATTGTTGGACAAGAAATTCCATATGCTTTACCTGGTGGGCAAGTATCCCATAATGATGCAGTATTGAGGATGGAAAGGAAACGGAAGAGTGATGAAGCAAGAGTTGCTAAGGAAGTTGAAGCCTATGAAATGAGGATGCGGAAAGAGCTTGAAAAACAAGATAACCTCAGACGAAAGAGTGAAGAGAGATTGAAGAAGGAAATGGAAAGGCAAGATCGTGAGAGAAGGAAGGAAGAAGAGAGATTGTTGCGTGAGAAACAGCGAGAAGAGGAAAGATCAAAACGTGAGCAAAGGCGGGAAATGGAGCGAAGGGAAAAATTTTTGTTGAAAGAACATTTGAGAGCTGAGAAAAGGAGGCAAAAAGAAGAGATCCGCAAAGAGAAAGAGGAAGAGAGGAGGAAAGCTGCACTTGAGAAGGCAAATGCTCGAAGAATAGCTAAAGAATCTATGGAGCTTATCGAAGATGAACAACTGGAATTGATGGAGTTGGCTGCTGCAAGCAAGGGGCTTTCCTCTATTATTCATATTGATCTTGATACTTTGCAAAACCTTGAATCATTTAGGGATTCATTGTGTGTATTTCCACCGAAGAGTGTAAAGCTGAGAAAACCATTTGCTATTCAACCCTGGAGCAACTCAGAACAGAATGTTGGCAACCTTCTCATGGTTTGGAGATTCTTGATTACTTTTGCTGATGTTCTTGATTTATGGCCTTTTACTCTTGATGAGTTTGTACAGGCATTTCACGACTATGATTCTAGATTGTTGGGCGAGATACATGTTGCTCTTCTCAAGGTGATAATAAAGGACATTGAAGATGTTGCTAGGACACCTTCTACTGGATTGGGGATGAATCAGAATGGAGCTGCTAATCCTGGAGGTGGCCATCCAGAGATTGTAGAAGGAGCATATGCATGGGGCTTTGACATACGAAATTGGCAGAAGAACTTGAACCAGTTGACGTGGCCAGAAATATTCCGACAGTTAGCACTGTCTGCAGGATTAGGACCGCATCTGAAGAAAAGAAGCATTGCATGGTCATATGCAATTGATAAAGACGAGGGTAAAAGTTGCGTAGATATCATTTCTACACTTCGTAATGGTTCAGCAGCTGAAAGTGCTGTGGCCAAAATGCAAGAGAGAGGTCTGTTAGCTCCCCGAAGGTCAAGGCACAGGTTAACTCCTGGAACAGTTAAATTTGCAGCATTTCATGTTCTCTCACTGGAAGGTAGCAAGGGTTTGACAGTACTAGAGCTTGCAGAAAAAATTCAGAAATCTGGTCTTCGGGACCTAACAACCAGCAAGACACCTGAAGCATCAATTTCTGTTGCTTTGACAAGAGACACTAAGTTGTTTGAAAGAATAGCTCCATCAACATATTGTGTACGAGATGCATTCAGAAAGGATCCTGCTGATGCTGACTCCATTCTTTCGGAAGCAAGAAAAAAAATTCAGATATTTGAAAATGGGTTTCTAGCTGGTGAAGATGCTGATGATGTTGAAAGAGAAGAGGAGTCAGAAAGTGATGAAGTTGATGAGGATCCTGAAGATGATGATTTAGTAAATCCTTCAGGTGCTAACCAAAATTCTGAACAGTATGATGACACAAACATATGCCCATCAAATGGAAAAGAAAGTTTGGGTCACACCATAGATCTTATTCAGAATGAGTTTGATACAGATCTACCCTGTTTTCCTAAGAATAGTTCTACGGAGGCTGATTGTCCCAGTTCTGTCACCAGACCTGTTGCTTGTGGAGATTTAAATGCTGGCAGTCTTGATCAAGATAATATGGAAATTGATGAAAGCATATCTGGAGAGTCCTGGATTCTAGGGCTTGCAGAAGGAGAATATTCCGATCTCAGTGTAGAGGAGCGTCTAAATGCTCTTGTTGCTTTAGTTGGTGTGGCAAATGAAGGAAATTCAATCCGTGTTGTCCTTGAGGATCGACTGGAATCTGCAAATGCTCTGAAGAAACAAATGTGGGCAGACGCACAGATTGATAAAGTTCGTCTGAAAGATGATAATATTATTAGATTAGATTTTCCATCTCTTACTGGGAATAAAGTCGAAACACAATACACATATCCAGCTGTGGAGGGAAACCAAAGCCCAATGATGCTTGACATTAATATTAACAATAATGAAGCATCACCCAGCACTGCAGAAAACCAAAAAGGAGCTCCTGTTGCACAGAGTATGCATATGGAGAAGTCCTCATCCATTCAAGATTTTGGCACAGGTACTGGTGCAGACATCCCTCAGACTCAGGTACCTGCACAATATTCAAAAAGGTCACGTTCACAGTTGAAATCTTATTTTGCCCACCTAGCAGAGGAGATGTATGTCTACCGCTCTTTACCCCTTGGCCAAGATCGCAGACGTAATCGATATTGGCAGTTTGTTGCATCTGCTTCTAGCAGTGATCCTGGTTCTGGCAGGATCTTTGTTGAATGTCATGATGGCAAGTGGTGGCTTATTGATTCTGAAGAGGCCTTTGATTCTCTTTTGACATCATTGGATTCACGTGGGCTCAGGGAATCTCATTTGCGTTTAATGTTGCAAAAGATTGAGAATTCCTTTAAAGAAAATGTTCGAAAGAGGAATGCACATTATGCCAAAAATGGAAGCAGAGGCGAAGTTTCTATAAAAATTGAAGCTAACGAACCCTATTCTATCCCTGACCACAATGCTGGATCTGACAGTCCTAGCAGTACCCTCTATGATTTGAACACCGATACATCTGAAACTTCATCATCCTTCAAAATTGAGCTGGGGAAAAGTGAGATTGAGAAGAAAGCTGCATTGAGAAGGTATCAAGATTTTCAGAAGTGGTTGTGGAAAGAATGCTATAATTCTTCGGTGTTATGTGCAATGAAATATGGGATAAAGAGATGCAAACCTCAGATGGATATTTGTGATATCTGTCTCGATCTTTATTTTGTTGAAGACTTCCATTGCAGTTCCTGCCACCGGACTTTTCCCTCAAATAATGGATTAAATTTTTCTAAGCATGCATTGCAATGTTTATCCAAAGACAATTATATTTTGGAATACTCACTTCCCTTGCGGACAAGATTGCTTAAGCTCCTGTTGGCTTGTATGGAGGTTTCTGTTCTATCTGAAGCATTTGGAACAAATTGGTCCGACGATACAAGGAAGCACTGGGGTGTAAAGTTGAGCAAATCATCTTCTGTTGAGGAACTTATCCAGATATTGACCCTATTTGAGAAAGCCCTTCGGCGAGATTTTCTGTCATCTAACTTCTCTACAACAGATGAATTGTTGGAATCAAGCAGTATGTTAGAATGTTCTGGGCAGGCTTCAACTGACCCTGAATCTGTTGCTGTGCTTCCATGGGTTCCACTAACGACTGCAGCTTTGTCTCTCAGACTTTTTGAGATTGATTCATCCATCAGCTATGTAAAGCCTGAAAGACTTGAGCCTTCTGAGGAAAAAGAAGCAAGAGAATACATAAAGTTTCCATCAAGATACACTCACTTGAAATCTAATAGGGAGGTTGAACCAGAATTTGACCACGATGAATTCACTAAAGATAAATCTATTTCTAAGAAAACTGTACGAAGTGGCAATAAACGTAGTCGAGGGTCTAATGAACAAGGACGGGGCAAAAAACTGGCTAAAAGAGTGTACAATTCCAAAAGAGATGGTGGTCGGAAGAATGCTAAGGTCACTGTCAATCTGAGTCACAAATTAAAACAGCAGGCACGAGGAACACAAGGACAAGGTGCTGGGCGAGGTCGCCGAACAGTAAGAAAGCGGAGAGTGGGAAAGCGAGCTGTTGAAGATTTGTTGCTGGGCCATACGACAGCCAGTCATAGCTCCAAGATTGATAGAGAACCATTGAAAAACTTGGATGAGGAATGGGATGGAGAAAAGGCAAGTCCCATGACACCGGTACACATTGGGGTTGCTGCTGACAATAGTAATAGCGCTGAAGAGGTAGAATCTGATTATGACCATGCTCAAGCTGTGGAATATGATCAAGGAAACTGGGAGGTGGGTTTTAACGGCGTTCCCCCCAACAGATGGAATAGGGATTTGGTTGGAATGAGTGACGAGGACGTGGATGGTTCTGAAGATGACAATGATAATGGCATTGAAGAGAATGAAGATGAGGATTCAGAAGCAGATGTTATGAGTGAGGGTTCAGATGGGATGGGAACTAGGGTAGTAAATGTTCGAGGCTCATACTCAGCTTTGTCTGAAGATTCTTCTGATTAG 5241 0.4299 MEAEPDNNEVKREENSNDNNNNNESNSKFGNSSEGQSKPKRQMKTPFQLETLEKAYAVENYPSETMRGELSEKLGLSDRQLQMWFCHRRLKDKKDLPSKKPRKAAALPDSPVEEPKLASEVGAEYGSGSGSGSSPFTRSELRNVVPRGYYESPQTIMELRAIACVEAQLGEPLREDGPILGVEFDPLPPDAFGAPLAVTDPQKRPSLAYDSKIYERHDVRTNKAIARTFHEYPFLPSQSGIRSDVFGQLNLPHLHEPIEGPARTPFPLGSEQQPRIHAPQSHSSRVRLLSQPQDKQVIPYPSPPRENDVVPKREPHINITNTGMNSHYTDHPIVGQEIPYALPGGQVSHNDAVLRMERKRKSDEARVAKEVEAYEMRMRKELEKQDNLRRKSEERLKKEMERQDRERRKEEERLLREKQREEERSKREQRREMERREKFLLKEHLRAEKRRQKEEIRKEKEEERRKAALEKANARRIAKESMELIEDEQLELMELAAASKGLSSIIHIDLDTLQNLESFRDSLCVFPPKSVKLRKPFAIQPWSNSEQNVGNLLMVWRFLITFADVLDLWPFTLDEFVQAFHDYDSRLLGEIHVALLKVIIKDIEDVARTPSTGLGMNQNGAANPGGGHPEIVEGAYAWGFDIRNWQKNLNQLTWPEIFRQLALSAGLGPHLKKRSIAWSYAIDKDEGKSCVDIISTLRNGSAAESAVAKMQERGLLAPRRSRHRLTPGTVKFAAFHVLSLEGSKGLTVLELAEKIQKSGLRDLTTSKTPEASISVALTRDTKLFERIAPSTYCVRDAFRKDPADADSILSEARKKIQIFENGFLAGEDADDVEREEESESDEVDEDPEDDDLVNPSGANQNSEQYDDTNICPSNGKESLGHTIDLIQNEFDTDLPCFPKNSSTEADCPSSVTRPVACGDLNAGSLDQDNMEIDESISGESWILGLAEGEYSDLSVEERLNALVALVGVANEGNSIRVVLEDRLESANALKKQMWADAQIDKVRLKDDNIIRLDFPSLTGNKVETQYTYPAVEGNQSPMMLDININNNEASPSTAENQKGAPVAQSMHMEKSSSIQDFGTGTGADIPQTQVPAQYSKRSRSQLKSYFAHLAEEMYVYRSLPLGQDRRRNRYWQFVASASSSDPGSGRIFVECHDGKWWLIDSEEAFDSLLTSLDSRGLRESHLRLMLQKIENSFKENVRKRNAHYAKNGSRGEVSIKIEANEPYSIPDHNAGSDSPSSTLYDLNTDTSETSSSFKIELGKSEIEKKAALRRYQDFQKWLWKECYNSSVLCAMKYGIKRCKPQMDICDICLDLYFVEDFHCSSCHRTFPSNNGLNFSKHALQCLSKDNYILEYSLPLRTRLLKLLLACMEVSVLSEAFGTNWSDDTRKHWGVKLSKSSSVEELIQILTLFEKALRRDFLSSNFSTTDELLESSSMLECSGQASTDPESVAVLPWVPLTTAALSLRLFEIDSSISYVKPERLEPSEEKEAREYIKFPSRYTHLKSNREVEPEFDHDEFTKDKSISKKTVRSGNKRSRGSNEQGRGKKLAKRVYNSKRDGGRKNAKVTVNLSHKLKQQARGTQGQGAGRGRRTVRKRRVGKRAVEDLLLGHTTASHSSKIDREPLKNLDEEWDGEKASPMTPVHIGVAADNSNSAEEVESDYDHAQAVEYDQGNWEVGFNGVPPNRWNRDLVGMSDEDVDGSEDDNDNGIEENEDEDSEADVMSEGSDGMGTRVVNVRGSYSALSEDSSD* 1747
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g01287 1746 MobiDBLite consensus disorder prediction 19 44 - -
Lapu6g01287 1746 MobiDBLite consensus disorder prediction 1 49 - -
Lapu6g01287 1746 Coils Coil 371 477 - -
Lapu6g01287 1746 Gene3D - 21 96 - -
Lapu6g01287 1746 MobiDBLite consensus disorder prediction 385 432 - -
Lapu6g01287 1746 Pfam WSTF, HB1, Itc1p, MBD9 motif 1 937 980 IPR028942 -
Lapu6g01287 1746 MobiDBLite consensus disorder prediction 1693 1719 - -
Lapu6g01287 1746 MobiDBLite consensus disorder prediction 854 876 - -
Lapu6g01287 1746 MobiDBLite consensus disorder prediction 829 852 - -
Lapu6g01287 1746 Pfam Homeodomain 38 94 IPR001356 GO:0003677
Lapu6g01287 1746 MobiDBLite consensus disorder prediction 1566 1580 - -
Lapu6g01287 1746 MobiDBLite consensus disorder prediction 1504 1593 - -
Lapu6g01287 1746 ProSiteProfiles HARE-type HTH domain profile. 728 797 IPR007759 GO:0006355
Lapu6g01287 1746 MobiDBLite consensus disorder prediction 95 116 - -
Lapu6g01287 1746 Pfam HB1, ASXL, restriction endonuclease HTH domain 728 796 IPR007759 GO:0006355
Lapu6g01287 1746 MobiDBLite consensus disorder prediction 1 18 - -
Lapu6g01287 1746 Pfam DDT domain 548 602 IPR018501 -
Lapu6g01287 1746 MobiDBLite consensus disorder prediction 1534 1560 - -
Lapu6g01287 1746 ProSiteProfiles 'Homeobox' domain profile. 35 95 IPR001356 GO:0003677
Lapu6g01287 1746 MobiDBLite consensus disorder prediction 1677 1730 - -
Lapu6g01287 1746 CDD homeodomain 40 94 IPR001356 GO:0003677
Lapu6g01287 1746 SMART HOX_1 37 99 IPR001356 GO:0003677
Lapu6g01287 1746 SUPERFAMILY Homeodomain-like 25 94 IPR009057 -
Lapu6g01287 1746 ProSiteProfiles DDT domain profile. 546 605 IPR018501 -
Lapu6g01287 1746 MobiDBLite consensus disorder prediction 826 876 - -
Lapu6g01287 1746 SMART testlast3 546 605 IPR018501 -
Lapu6g01287 1746 MobiDBLite consensus disorder prediction 95 109 - -
Lapu6g01287 1746 Pfam Williams-Beuren syndrome DDT (WSD), D-TOX E motif 1117 1189 IPR028941 -
Lapu6g01287 1746 MobiDBLite consensus disorder prediction 1504 1525 - -
Lapu6g01287 1746 PANTHER HOMEOBOX-DDT DOMAIN PROTEIN RLT2 13 1746 IPR044977 GO:0006357
Lapu6g01287 1746 MobiDBLite consensus disorder prediction 257 287 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g01287 Lapu-Chr6 12726145 12735618 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu6g01287 31 1676 Homeobox Transcription Factor Family AT1G28420 48.540 0.0 1311
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-other Lapu6g01287 WSD 4.9e-15 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g01287 - - gmx:100777465 2857.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu6g01287 6 12726145 12735618 Lapu6g01287 6 12726145 12735618 ECH
Lapu3g03064 3 53852984 53864667 Lapu6g01287 6 12726145 12735618 PCT