Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g01231 ATGACTTGTGGCTGCTTTGGAGCCAAATCTGTAAAAAAAAGACGCCCTTCTAATGTTTATGGAGAAATTGATGGTTATCCCCTTGATAATGTTAGGCAATTTTCTGATACAGAACTGAGATTGGCAACTGATAATTATCACGCAAACAATAAGATAGGACGAGGAGGTTTTGGAACCGTTTACCAGGGAACCTTAAGAGATGGCAGACGTATAGCAGTGAAGACTCTCTCAATTTGGTCAAAGCAGGGAGTTCGTGAATTTTTGACTGAAATTAAAACTTTGTCAAATGTTAAACATCCGAACCTTGTTGAATTGATTGGATTCTGCATCCAAGGACCTAATCGTACATTAGTCTACGAGCATGTGGAAAATGGAAGCCTTAATAGTGCGCTACTTGGCACAAGGAATGGAAGCATTAAACTGGACTGGAGAAAAAGATCTGCTATCTGTGTAGGTACTGCTAAGGGTCTTGCATTTCTTCATGAAGAACTTTCGCCACCAATTGTGCACAGAGACATCAAAGCTAGTAATCTACTACTTGACCAAAATTTCAATCCCAAAATAGGTGATTTTGGGTTGGCTAAATTATTTCCAGATGATATCACTCACGTTAGCACAAGAATAGCTGGAACAACCGTTTTGTTTGTTGCCCAAATCCTTATCCCTACATACAGTTATTGGATCAATGGTTACTTAGCACCTGAATATGCAATAGGTGGACAGTTAACCAAGAAGGCTGATATATACAGCTTTGGGGTTCTTATACTTGAAATAGTTAGTGGTAGAAGCAGTGCCAGCAGGACAAACGGAGGAGGATCATACAAATTCCTCTTGGAATGGGCCTGGCAACTTTATGAGGAGGGAAAATTGTTGGAGTTTGTAGATCCAGACATGGAAGAGTTTCCTGCGGAAGAGGTAATGAGATACATGAAGGTTGCACTTTTCTGCACACAGTCTGCAGCAAGTAGAAGGCCTTTGATGATACAAGTTGTTGATATGCTATCCAAGGCAATCCAACTCAATGAAAAAGAACTTACAGCACCAGGATTCTTTGTAGATGGAGAATCTTCCAGAATGAGCTCACAGCCTGTCCCTTTTATTACCTCTACTCATGTTGCTATTACTCAGGTCACCCCACGCTGA 1143 0.4077 MTCGCFGAKSVKKRRPSNVYGEIDGYPLDNVRQFSDTELRLATDNYHANNKIGRGGFGTVYQGTLRDGRRIAVKTLSIWSKQGVREFLTEIKTLSNVKHPNLVELIGFCIQGPNRTLVYEHVENGSLNSALLGTRNGSIKLDWRKRSAICVGTAKGLAFLHEELSPPIVHRDIKASNLLLDQNFNPKIGDFGLAKLFPDDITHVSTRIAGTTVLFVAQILIPTYSYWINGYLAPEYAIGGQLTKKADIYSFGVLILEIVSGRSSASRTNGGGSYKFLLEWAWQLYEEGKLLEFVDPDMEEFPAEEVMRYMKVALFCTQSAASRRPLMIQVVDMLSKAIQLNEKELTAPGFFVDGESSRMSSQPVPFITSTHVAITQVTPR* 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g01231 380 FunFam Putative LRR receptor-like serine/threonine-protein kinase 122 346 - -
Lapu6g01231 380 SUPERFAMILY Protein kinase-like (PK-like) 27 334 IPR011009 -
Lapu6g01231 380 ProSitePatterns Serine/Threonine protein kinases active-site signature. 168 180 IPR008271 GO:0004672|GO:0006468
Lapu6g01231 380 ProSiteProfiles Protein kinase domain profile. 46 367 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu6g01231 380 SMART serkin_6 46 351 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu6g01231 380 ProSitePatterns Protein kinases ATP-binding region signature. 52 74 IPR017441 GO:0005524
Lapu6g01231 380 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 30 364 - -
Lapu6g01231 380 CDD STKc_IRAK 52 336 - -
Lapu6g01231 380 Pfam Protein kinase domain 46 274 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu6g01231 380 FunFam cold-responsive protein kinase 1 17 121 - -
Lapu6g01231 380 Gene3D Phosphorylase Kinase; domain 1 21 121 - -
Lapu6g01231 380 Gene3D Transferase(Phosphotransferase) domain 1 122 347 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g01231 Lapu-Chr6 12164318 12167415 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu6g01231 34 353 Receptor kinase-like Gene Family AT1G56120 48.750 5.19e-98 308
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Lapu6g01231 Pkinase 8e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g01231 - - gmx:100809588 631.328